RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TFGQ92734 400 aaPredicted RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 HAS2Q92819 552 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 DCUN1D1Q96GG9 259 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 MESP1Q9BRJ9 268 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 SOX17Q9H6I2 414 aaPredicted RBP10.5□□□□□ -0.73
DDX41-216ENST00000513562 ASB8Q9H765 288 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 ZNF160Q9HCG1 818 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 EURLQ9NYK6 297 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PLA2G3Q9NZ20 509 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 CTSFQ9UBX1 484 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 PCNX1Q96RV3 2341 aa10.5□□□□□ -0.73
DDX41-216ENST00000513562 APOL1O14791 398 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 ATP1B2P14415 290 aaPredicted RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 ACPPP15309 386 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 NFKB1P19838 968 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 FDXRP22570 491 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 FANCCQ00597 558 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 C3AR1Q16581 482 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 VSIG1Q86XK7 387 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 KBTBD2Q8IY47 623 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 MMP21Q8N119 569 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 ADAMTS18Q8TE60 1221 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 OXNAD1Q96HP4 312 aaPredicted RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 TREX2Q9BQ50 279 aaPredicted RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 ENKD1Q9H0I2 346 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
DDX41-216ENST00000513562 ENAMQ9NRM1 1142 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 OR6C2Q9NZP2 312 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 PTGFRNQ9P2B2 879 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 FKBPLQ9UIM3 349 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 TINAGQ9UJW2 476 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 ARL5AQ9Y689 179 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
DDX41-216ENST00000513562 A0A1B0GTL3 188 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 LRRD1A4D1F6 860 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 C3orf70A6NLC5 250 aaPredicted RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 CFAP99D6REC4 459 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 DSCR3O14972 297 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 RASAL1O95294 804 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 NADKO95544 446 aaPredicted RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 PRR35P0CG20 571 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 PEBP1P30086 187 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 CARSP49589 748 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 XIAPP98170 497 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 SRSF11Q05519 484 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 WASHC5Q12768 1159 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 YOD1Q5VVQ6 348 aaPredicted RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 FAAH2Q6GMR7 532 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 NLRP9Q7RTR0 991 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 MCATQ8IVS2 390 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 IPMKQ8NFU5 416 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 OR4K2Q8NGD2 314 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 OR5AR1Q8NGP9 310 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 CCDC110Q8TBZ0 833 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 BRIX1Q8TDN6 353 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 HEXDCQ8WVB3 486 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 ULK4Q96C45 1275 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 FCRL5Q96RD9 977 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 COPS8Q99627 209 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 CRB3Q9BUF7 120 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 RNF32Q9H0A6 362 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 CUTCQ9NTM9 273 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 CRLS1Q9UJA2 301 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
DDX41-216ENST00000513562 NEU2Q9Y3R4 380 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 FER1L5A0AVI2 2057 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 SPTBP11277 2137 aa10.48□□□□□ -0.73
DDX41-216ENST00000513562 PKDREJQ9NTG1 2253 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 IGLV3-16A0A075B6K0 115 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 A0A087X0T9 212 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 A0A1W2PQ72 361 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 MAP2K7O14733 419 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 FANCGO15287 622 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 WISP2O76076 250 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 SERPINA7P05543 415 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 FAM228BP0C875 321 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 TPBGLP0DKB5 382 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 COX6A1P12074 109 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 ZFXP17010 805 aaPredicted RBP10.47□□□□□ -0.73
DDX41-216ENST00000513562 MAGP20916 626 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 OR1D4P47884 311 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 ART1P52961 327 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 CSNK1G2P78368 415 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 KIR2DS3Q14952 304 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 TAF1AQ15573 450 aaPredicted RBP10.47□□□□□ -0.73
DDX41-216ENST00000513562 ATG9BQ674R7 924 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 ZNF449Q6P9G9 518 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 Q6ZPB1 254 aaPredicted RBP10.47□□□□□ -0.73
DDX41-216ENST00000513562 C8orf44Q96CB5 159 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.47□□□□□ -0.73
DDX41-216ENST00000513562 ANO10Q9NW15 660 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 IL1RAPL1Q9NZN1 696 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 LCMT1Q9UIC8 334 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms