RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CTAG2O75638 210 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 SLC4A1P02730 911 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 VCLP18206 1134 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 PBLDP30039 288 aaPredicted RBP8.75□□□□□ -1.01
NUP54-211ENST00000512151 CYLC1P35663 651 aaPredicted RBP8.75□□□□□ -1.01
NUP54-211ENST00000512151 GCGRP47871 477 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 DCDC1P59894 354 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 HSF1Q00613 529 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 CACNG1Q06432 222 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 DSG2Q14126 1118 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 RBBP7Q16576 425 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 NKG7Q16617 165 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 FAM182AQ5T1J6 154 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 ERMARDQ5T6L9 678 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 OVCH1Q7RTY7 1134 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 BBS5Q8N3I7 341 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 MARVELD2Q8N4S9 558 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 RASGEF1AQ8N9B8 481 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 CCHCR1Q8TD31 782 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 THAP3Q8WTV1 239 aaPredicted RBP8.75□□□□□ -1.01
NUP54-211ENST00000512151 NAT14Q8WUY8 206 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 TEKT4Q8WW24 435 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 C8orf44Q96CB5 159 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 RMDN2Q96LZ7 410 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 MYO1AQ9UBC5 1043 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 CTSFQ9UBX1 484 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 PYCARDQ9ULZ3 195 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 PPT2Q9UMR5 302 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 SHOC2Q9UQ13 582 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 AP1M2Q9Y6Q5 423 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 HIVEP2P31629 2446 aa8.75□□□□□ -1.01
NUP54-211ENST00000512151 SNRNP200O75643 2136 aaKnown RBP8.75□□□□□ -1.01
NUP54-211ENST00000512151 ANKRD62A6NC57 917 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 E9PLN8 166 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 FAM227AF5H4B4 570 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 GPR39O43194 453 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 ZWINTO95229 277 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 PRAMEF1O95521 474 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 HPP00738 406 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 CYP1A2P05177 515 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 MMP2P08253 660 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 HOXD4P09016 255 aaPredicted RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 H2AFZP0C0S5 128 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 TMEM253P0C7T8 217 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 PRR35P0CG20 571 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 DNASE1P24855 282 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 HCAR3P49019 387 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 RPL26P61254 145 aaKnown RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 PRKAA1Q13131 559 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 MYBPHQ13203 477 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 OLIG2Q13516 323 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 ATP13A5Q4VNC0 1218 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 METRNLQ641Q3 311 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 PDPK2PQ6A1A2 396 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 DNAJC24Q6P3W2 148 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 H2AFVQ71UI9 128 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 PHC2Q8IXK0 858 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 DTWD1Q8N5C7 304 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 ATPAF2Q8N5M1 289 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 LILRA3Q8N6C8 439 aaPredicted RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 BEND7Q8N7W2 519 aaPredicted RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 LRRN4Q8WUT4 740 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 VKORC1Q9BQB6 163 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 TRIM7Q9C029 511 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 POLR1EQ9GZS1 481 aaKnown RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 LACRTQ9GZZ8 138 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 TXLNGQ9NUQ3 528 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 LRFN1Q9P244 771 aa8.74□□□□□ -1.01
NUP54-211ENST00000512151 NFKBIL1Q9UBC1 381 aaPredicted RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 RPL26L1Q9UNX3 145 aaKnown RBP8.74□□□□□ -1.01
NUP54-211ENST00000512151 OR2AG2A6NM03 316 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ANKRD66B4E2M5 251 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 NPIPA5E9PKD4 350 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 WIPF1O43516 503 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 KCNJ13O60928 360 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 USP1O94782 785 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ZRANB2O95218 330 aaKnown RBP eCLIP8.73□□□□□ -1.01
NUP54-211ENST00000512151 MT-CYBP00156 380 aaPredicted RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 CALB1P05937 261 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 CDH6P55285 790 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 YBX1P67809 324 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 HIBCHQ6NVY1 386 aaPredicted RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 TMEM220Q6QAJ8 160 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 TMC3Q7Z5M5 1100 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 SIAH3Q8IW03 269 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 ADGRF3Q8IZF5 1079 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 C19orf47Q8N9M1 422 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 NSMCE1Q8WV22 266 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 LCN9Q8WX39 176 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 FKBP10Q96AY3 582 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 MBD6Q96DN6 1003 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 GPATCH1Q9BRR8 931 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
NUP54-211ENST00000512151 HES7Q9BYE0 225 aa8.73□□□□□ -1.01
NUP54-211ENST00000512151 SRMSQ9H3Y6 488 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms