RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 IL1RNP18510 177 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NR1D1P20393 614 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CD9P21926 228 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KELP23276 732 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 COILP38432 576 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC1A2P43004 574 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FOXA1P55317 472 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF5AP63241 154 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC25A3Q00325 362 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP24A1Q07973 514 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR50Q13585 617 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TFDP2Q14188 446 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SHHQ15465 462 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM189A2Q15884 450 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 QRICH1Q2TAL8 776 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTLL9Q3SXZ7 439 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GXYLT1Q4G148 440 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C4orf46Q504U0 113 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARHGAP15Q53QZ3 475 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM47AQ5JRC9 791 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEP78Q5JTW2 689 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBCELQ5QJ74 424 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OTUD3Q5T2D3 398 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFIT1BQ5T764 474 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GARNL3Q5VVW2 1013 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 UGT3A1Q6NUS8 523 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KDELC1Q6UW63 502 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM180AQ6UWF9 173 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFSD7Q6UXD7 560 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C19orf35Q6ZS72 473 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAPN12Q6ZSI9 719 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FRA10AC1Q70Z53 315 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEP68Q76N32 757 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFL1Q7Z2Z2 1120 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 POLNQ7Z5Q5 900 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR142Q7Z601 462 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZSWIM9Q86XI8 627 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 XYLT1Q86Y38 959 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CBWD2Q8IUF1 395 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC60Q8IWA6 550 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCN4BQ8IWT1 228 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MICU2Q8IYU8 434 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PHACTR4Q8IZ21 702 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKRD13CQ8N6S4 541 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1orf127Q8N9H9 656 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 B4GALNT2Q8NHY0 566 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC8CQ8TDW0 803 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HLA-CQ95604 372 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNF8Q96H20 258 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NSL1Q96IY1 281 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 COG8Q96MW5 612 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASD1Q96PB1 797 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC2A13Q96QE2 648 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST1H2AAQ96QV6 131 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC3Q9BQI4 270 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C7orf50Q9BRJ6 194 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRTAP9-2Q9BYQ4 174 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NIF3L1Q9GZT8 377 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 WWP1Q9H0M0 922 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR13Q9H1Z4 485 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEF1Q9HAY2 307 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCCC2Q9HCC0 563 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LATS2Q9NRM7 1088 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 AASDHPPTQ9NRN7 309 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1orf112Q9NSG2 853 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARHGEF38Q9NXL2 777 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SEL1LQ9UBV2 794 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNN3Q9UGI6 736 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TESQ9UGI8 421 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZMYM5Q9UJ78 669 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 APPL1Q9UKG1 709 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FBXL21Q9UKT6 434 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMCO1Q9UM00 188 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA2Q9UM82 520 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 DUSP12Q9UNI6 340 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 POMPQ9Y244 141 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARL2BPQ9Y2Y0 163 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHB11Q9Y5F2 797 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC162PA2VCL2 907 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFCAB7A8K855 629 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 EVPLLA8MZ36 301 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L15C9J2P7 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L13C9JLJ4 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L11C9JVI0 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L18D6R9N7 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L22D6RA61 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L17D6RBQ6 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L19D6RCP7 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L20D6RJB6 530 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 F8VP50 259 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 VWA5AO00534 786 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAPN5O15484 640 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP26A1O43174 497 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TPD52L2O43399 206 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADCY3O60266 1144 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KERAO60938 352 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB36O95755 333 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALPLP05186 524 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 INHBAP08476 426 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms