RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZDHHC20Q5W0Z9 365 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 TRMT11Q7Z4G4 463 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CATSPER3Q86XQ3 398 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARFGAP1Q8N6T3 406 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 TTC29Q8NA56 475 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 RSC1A1Q92681 617 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 BADQ92934 168 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ADIPOR1Q96A54 375 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ELP4Q96EB1 424 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SSX3Q99909 188 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VRK1Q99986 396 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CHID1Q9BWS9 393 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NAT10Q9H0A0 1025 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DDX47Q9H0S4 455 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 MTIF3Q9H2K0 278 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF552Q9H707 407 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ECT2Q9H8V3 914 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 IPPKQ9H8X2 491 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DMAP1Q9NPF5 467 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DDX19AQ9NUU7 478 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PGPEP1Q9NXJ5 209 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SMARCAL1Q9NZC9 954 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF212Q9UDV6 495 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 WARS2Q9UGM6 360 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NENFQ9UMX5 172 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KCNK6Q9Y257 313 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PLEKHA6Q9Y2H5 1048 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PADI2Q9Y2J8 665 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 EMSYQ7Z589 1322 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PRUNE2Q8WUY3 3088 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CHD7Q9P2D1 2997 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PRAMEF27A3QJZ7 478 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 OR2A25A4D2G3 310 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARGFXA6NJG6 315 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRRC53A6NM62 1247 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 HAS3O00219 553 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 BTN3A1O00481 513 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 HS3ST1O14792 307 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 MATN3O15232 486 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 EIF3HO15372 352 aaKnown RBP eCLIP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 BIRC5O15392 142 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DCXO43602 365 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 LANCL1O43813 399 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 N4BP1O75113 896 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 UBOX5O94941 541 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VTNP04004 478 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 UGT2B4P06133 528 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CAPN1P07384 714 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT19P08727 400 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SBK2P0C263 348 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CYP4B1P13584 511 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 LCP1P13796 627 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 MTHFD2P13995 350 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ITIH1P19827 911 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NR1D1P20393 614 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CD27P26842 260 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 POU1F1P28069 291 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 YWHABP31946 246 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SERPINB6P35237 376 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 FRKP42685 505 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 RAP1GAPP47736 663 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CD97P48960 835 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 PCYT1AP49585 367 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CDK7P50613 346 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CDH6P55285 790 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 BPIFB4P59827 614 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 HNRNPKP61978 463 aaKnown RBP eCLIP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCZ1BP86790 482 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCZ1P86791 482 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ATP2C1P98194 919 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CYP24A1Q07973 514 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 OLIG2Q13516 323 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NR0B2Q15466 257 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NDUFA5Q16718 116 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KIZQ2M2Z5 673 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 DPY19L1Q2PZI1 675 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ACCSLQ4AC99 568 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 MARCH8Q5T0T0 291 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KIAA0930Q6ICG6 404 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRFN4Q6PJG9 635 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 RTL4Q6ZR62 310 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 FRA10AC1Q70Z53 315 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 HAUS6Q7Z4H7 955 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 FRMD5Q7Z6J6 570 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VTCN1Q7Z7D3 282 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF554Q86TJ5 538 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 FUKQ8N0W3 1084 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARHGAP18Q8N392 663 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 UXS1Q8NBZ7 420 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SRFBP1Q8NEF9 429 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NDNFQ8TB73 568 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ATP8B4Q8TF62 1192 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NMD3Q96D46 503 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 C16orf58Q96GQ5 468 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CEP170P1Q96L14 293 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 APOLD1Q96LR9 279 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 CCDC42Q96M95 316 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 FCRL3Q96P31 734 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms