RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PRSS16Q9NQE7 514 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 ELOVL2Q9NXB9 296 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 FBXL12Q9NXK8 326 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 RGL1Q9NZL6 768 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 NAP1L2Q9ULW6 460 aaPredicted RBP5.37□□□□□ -1.55
GYPB-212ENST00000511198 OSGIN2Q9Y236 505 aa5.37□□□□□ -1.55
GYPB-212ENST00000511198 NEMP2A6NFY4 417 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 ERICH4A6NGS2 130 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 SPRY1O43609 319 aaPredicted RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 RAD1O60671 282 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 MAGEC1O60732 1142 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 ATP2C2O75185 946 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 SMC2O95347 1197 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 IVLP07476 585 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 MBL2P11226 248 aaPredicted RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 ODC1P11926 461 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 TCN2P20062 427 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 HNRNPH3P31942 346 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 MFAP3P55082 362 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 HNRNPH2P55795 449 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 RAE1P78406 368 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 CDK18Q07002 472 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 TUBB2AQ13885 445 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 DEFB133Q30KQ1 61 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 POM121L1PQ3SYA9 428 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 EARS2Q5JPH6 523 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 ADALQ6DHV7 355 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 FAM173BQ6P4H8 233 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 SYT10Q6XYQ8 523 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 OTUD6AQ7L8S5 288 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 FJX1Q86VR8 437 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 ANKRD13BQ86YJ7 626 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 SLC35F3Q8IY50 421 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 FBXL16Q8N461 479 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 GOLGA5Q8TBA6 731 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 TTC17Q96AE7 1141 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 GFM1Q96RP9 751 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 BARD1Q99728 777 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 TUBB2BQ9BVA1 445 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 GATA5Q9BWX5 397 aaPredicted RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 AGXT2Q9BYV1 514 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 FOXP1Q9H334 677 aaPredicted RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 PABPC3Q9H361 631 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 GOLPH3LQ9H4A5 285 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 YY1AP1Q9H869 796 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 GPN2Q9H9Y4 310 aaPredicted RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 ZBTB26Q9HCK0 441 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 TRMT1Q9NXH9 659 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 PLK2Q9NYY3 685 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 WDR35Q9P2L0 1181 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 NCKAP1Q9Y2A7 1128 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 NTNG1Q9Y2I2 539 aa5.36□□□□□ -1.55
GYPB-212ENST00000511198 MRPS18BQ9Y676 258 aaKnown RBP5.36□□□□□ -1.55
GYPB-212ENST00000511198 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 CITO14578 2027 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 A0A087WWV3 80 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 SERINC4A6NH21 518 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 LRRC72A6NJI9 287 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 INAFM1C9JVW0 142 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 INSIG1O15503 277 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 RTN3O95197 1032 aaPredicted RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 PLAUP00749 431 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 TUBBP07437 444 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 TSHRP16473 764 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 F8A1P23610 371 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 GNAQP50148 359 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 DGKQP52824 942 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 PMS2P54278 862 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 STIM1Q13586 685 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 C16orf72Q14CZ0 275 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 BRD3Q15059 726 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 PDLIM3Q53GG5 364 aaPredicted RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 DCAF10Q5QP82 559 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 KIAA0408Q6ZU52 694 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 ZBTB8OSQ8IWT0 167 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 SCN4BQ8IWT1 228 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 RBMXL3Q8N7X1 1067 aaKnown RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 ZNF548Q8NEK5 533 aaPredicted RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 GANCQ8TET4 914 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 STARD8Q92502 1023 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 GOLGA1Q92805 767 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 LRRC46Q96FV0 321 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 ZNF274Q96GC6 653 aaPredicted RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 PIWIL1Q96J94 861 aaKnown RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 FCRL5Q96RD9 977 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 USP28Q96RU2 1077 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 LXNQ9BS40 222 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 SPRY4Q9C004 299 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 XPO4Q9C0E2 1151 aaKnown RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 INTS2Q9H0H0 1204 aaKnown RBP5.35□□□□□ -1.55
GYPB-212ENST00000511198 TMEM8AQ9HCN3 771 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 ARFGAP3Q9NP61 516 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 ABHD10Q9NUJ1 306 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 NCKIPSDQ9NZQ3 722 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.35□□□□□ -1.55
GYPB-212ENST00000511198 PILRAQ9UKJ1 303 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 CLEC4EQ9ULY5 219 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 ZGRF1Q86YA3 2104 aa5.35□□□□□ -1.55
GYPB-212ENST00000511198 POM121BA6NF01 834 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms