RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 STX3Q13277 289 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 C1orf61Q13536 156 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 CLCA4Q14CN2 919 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 PCBP2Q15366 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
LETM1-204ENST00000510940 PHKG1Q16816 387 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 HLA-BQ31612 363 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 LRRC70Q7Z2Q7 622 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 CCL4L1Q8NHW4 92 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 UBTD2Q8WUN7 234 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 RHBDF1Q96CC6 855 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 TDRKHQ9Y2W6 561 aaKnown RBP13.11□□□□□ -0.31
LETM1-204ENST00000510940 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
LETM1-204ENST00000510940 PCM1Q15154 2024 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 NCF1BA6NI72 391 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 NCF1CA8MVU1 366 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 YY2O15391 372 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 STK16O75716 305 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 MLYCDO95822 493 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 SBK3P0C264 359 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 SHMT2P34897 504 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 BDKRB1P46663 353 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 KCNC1P48547 511 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 CHI3L2Q15782 390 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 LPAL2Q16609 132 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 CAPN13Q6MZZ7 669 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 SFRP1Q8N474 314 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 AFAP1L2Q8N4X5 818 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 CCNYL1Q8N7R7 359 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 OR6C4Q8NGE1 309 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 OR5AR1Q8NGP9 310 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 DLG3Q92796 817 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 MAGEB10Q96LZ2 347 aaPredicted RBP13.1□□□□□ -0.31
LETM1-204ENST00000510940 PKP4Q99569 1192 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 MIPEPQ99797 713 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 ARRDC1-AS1Q9H2J1 176 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 UCK1Q9HA47 277 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 THAP1Q9NVV9 213 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 NLGN3Q9NZ94 848 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 OPTCQ9UBM4 332 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 IKZF3Q9UKT9 509 aa13.1□□□□□ -0.31
LETM1-204ENST00000510940 OR52A4PA6NMU1 304 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 B4DGG1 531 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 K7EPI3 171 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 SUPT7LO94864 414 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 ZNF883P0CG24 379 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 BGNP21810 368 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 EPHA8P29322 1005 aaPredicted RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 EEF1DP29692 281 aaKnown RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 RAB28P51157 221 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 PNLIPRP1P54315 467 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 NAGLUP54802 743 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 GALNT1Q10472 559 aaPredicted RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 RCN2Q14257 317 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 ZNF678Q5SXM1 525 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 C6orf132Q5T0Z8 1188 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 OGFOD3Q6PK18 319 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 AGTRAPQ6RW13 159 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 KLHDC8AQ8IYD2 350 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 TMEM131Q92545 1883 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 SLC22A18Q96BI1 424 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 MECRQ9BV79 373 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 SLC32A1Q9H598 525 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 OR6C2Q9NZP2 312 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 STOX2Q9P2F5 926 aaPredicted RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 ST14Q9Y5Y6 855 aa13.09□□□□□ -0.31
LETM1-204ENST00000510940 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
LETM1-204ENST00000510940 MATN2O00339 956 aa13.08□□□□□ -0.32
LETM1-204ENST00000510940 PCDHGA12O60330 932 aa13.08□□□□□ -0.32
LETM1-204ENST00000510940 HSPA4LO95757 839 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms