RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 HOOK3Q86VS8 718 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 RPRMLQ8N4K4 120 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 RASGEF1AQ8N9B8 481 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 MDS2Q8NDY4 140 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 BRSK1Q8TDC3 778 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 DENND1AQ8TEH3 1009 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 NELFBQ8WX92 580 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 ZNF653Q96CK0 615 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 SCMH1Q96GD3 660 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 Q96MF0 132 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 MCEEQ96PE7 176 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 BDH2Q9BUT1 245 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 SNRNP25Q9BV90 132 aaKnown RBP10.29□□□□□ -0.76
SNF8-207ENST00000509995 ZCCHC2Q9C0B9 1178 aaKnown RBP10.29□□□□□ -0.76
SNF8-207ENST00000509995 VPS16Q9H269 839 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 TP63Q9H3D4 680 aaPredicted RBP10.29□□□□□ -0.76
SNF8-207ENST00000509995 TEKT2Q9UIF3 430 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 GNPTGQ9UJJ9 305 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 ACSL5Q9ULC5 683 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 HRH3Q9Y5N1 445 aa10.29□□□□□ -0.76
SNF8-207ENST00000509995 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 ANKRD62A6NC57 917 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 DSCR3O14972 297 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 ZNF24P17028 368 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CD53P19397 219 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CES1P23141 567 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 PTGER1P34995 402 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 PPP1R2P41236 205 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 HCAR3P49019 387 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 RPL7AP62424 266 aaKnown RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 AP2B1P63010 937 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 EEF1A2Q05639 463 aaKnown RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 GSE1Q14687 1217 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 ERMARDQ5T6L9 678 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 TMEM220Q6QAJ8 160 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CXorf67Q86X51 503 aaPredicted RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 ADGRF3Q8IZF5 1079 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 FAM98AQ8NCA5 519 aaKnown RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 SIGLEC12Q96PQ1 595 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 PEBP4Q96S96 227 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 MENTQ9BUN1 341 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 RIC8BQ9NVN3 520 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CWC15Q9P013 229 aaKnown RBP10.28□□□□□ -0.76
SNF8-207ENST00000509995 C3orf18Q9UK00 162 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CBLCQ9ULV8 474 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 PLCL2Q9UPR0 1127 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 SHOC2Q9UQ13 582 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 CTNND2Q9UQB3 1225 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
SNF8-207ENST00000509995 TGP01266 2768 aa10.27□□□□□ -0.76
SNF8-207ENST00000509995 TCRBV5S1A1TA0A578 114 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 SMC2O95347 1197 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 UGT2B7P16662 529 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 DESP17661 470 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 OR1D4P47884 311 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ZNF135P52742 658 aaPredicted RBP10.27□□□□□ -0.77
SNF8-207ENST00000509995 NUP107P57740 925 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 FANCCQ00597 558 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 FMO1Q01740 532 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 RUNX1T1Q06455 604 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 PMPCAQ10713 525 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 TUBA3CQ13748 450 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 FLYWCH1Q4VC44 716 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 RNFT1Q5M7Z0 435 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ACAD10Q6JQN1 1059 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 TIGD7Q6NT04 549 aaPredicted RBP10.27□□□□□ -0.77
SNF8-207ENST00000509995 TUBA3EQ6PEY2 450 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 TMCO3Q6UWJ1 677 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ACAD11Q709F0 780 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 TMC3Q7Z5M5 1100 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 AMIGO1Q86WK6 493 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 PAQR7Q86WK9 346 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ZNF677Q86XU0 584 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 P3H2Q8IVL5 708 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 PRSS58Q8IYP2 241 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 BEST3Q8N1M1 668 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 VWA5B2Q8N398 1253 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 DNAJC22Q8N4W6 341 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 METTL27Q8N6F8 245 aaPredicted RBP10.27□□□□□ -0.77
SNF8-207ENST00000509995 TMEM178AQ8NBL3 297 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 OR52E1Q8NGJ3 308 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ARRDC2Q8TBH0 407 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 STT3BQ8TCJ2 826 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 SMARCE1Q969G3 411 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 SARGQ9BW04 601 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 CLSTN2Q9H4D0 955 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 TFB2MQ9H5Q4 396 aaKnown RBP10.27□□□□□ -0.77
SNF8-207ENST00000509995 PLEKHF2Q9H8W4 249 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ETNK2Q9NVF9 386 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ADAM22Q9P0K1 906 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 FAM8A1Q9UBU6 413 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 ZNF407Q9C0G0 2248 aa10.27□□□□□ -0.77
SNF8-207ENST00000509995 A0A1B0GTH9 108 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 MGAT4DA6NG13 374 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 TRIM64A6NGJ6 449 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms