RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DCUN1D1Q96GG9 259 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF514Q96K75 400 aaPredicted RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 C9orf72Q96LT7 481 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 TGM7Q96PF1 710 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 NDNQ99608 321 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC38A3Q99624 504 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 OLFM1Q99784 485 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 ERP44Q9BS26 406 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 LRRC1Q9BTT6 524 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 POLR1BQ9H9Y6 1135 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 IARS2Q9NSE4 1012 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 SPHK1Q9NYA1 384 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 KLHL3Q9UH77 587 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 RALYQ9UKM9 306 aaKnown RBP7□□□□□ -1.29
TOPBP1-207ENST00000509162 CRYL1Q9Y2S2 319 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 PCDHGA8Q9Y5G5 932 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 MAD1L1Q9Y6D9 718 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM169AQ9Y6X4 670 aa7□□□□□ -1.29
TOPBP1-207ENST00000509162 CFAP46Q8IYW2 2715 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 IGHV5-51A0A0C4DH38 117 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 UBA6A0AVT1 1052 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 OR5K3A6NET4 321 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ARHGEF33A8MVX0 844 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 H3BMH7 237 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PLD2O14939 933 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 URI1O94763 535 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 UBXN7O94888 489 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 HAUS5O94927 633 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 SLCO2B1O94956 709 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 VIPP01282 170 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ANKRD34CP0C6C1 535 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 CDK4P11802 303 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PVRP15151 417 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PKLRP30613 574 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 GABRA4P48169 554 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ADARP55265 1226 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 GPLD1P80108 840 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 GUCY2DQ02846 1103 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PRKG2Q13237 762 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF460Q14592 562 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 KCNAB1Q14722 419 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TGIF1Q15583 401 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ZIC1Q15915 447 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 LONRF1Q17RB8 773 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TEDDM1Q5T9Z0 273 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 KIAA1614Q5VZ46 1190 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 CASC4Q6P4E1 433 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM71Q6P5X7 295 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM207Q6UWW9 146 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM92BQ6ZTR7 304 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PIWIL4Q7Z3Z4 852 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 KCNMB4Q86W47 210 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 FBXO36Q8NEA4 188 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 WDR36Q8NI36 951 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 DLG3Q92796 817 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ART4Q93070 314 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 LRRC45Q96CN5 670 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 CXorf40BQ96DE9 158 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TTC25Q96NG3 672 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 AARSD1Q9BTE6 412 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 CARD6Q9BX69 1037 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 SPRY4Q9C004 299 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 CCDC86Q9H6F5 360 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 TIMMDC1Q9NPL8 285 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 C20orf96Q9NUD7 363 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 MOCS1Q9NZB8 636 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 RNF14Q9UBS8 474 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 PISDQ9UG56 409 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 FBXO5Q9UKT4 447 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 POMT2Q9UKY4 750 aa6.99□□□□□ -1.29
TOPBP1-207ENST00000509162 ATRXP46100 2492 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 A0A087WV48 116 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TEX51A0A1B0GUA7 166 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 A0A1W2PPV9 198 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 OR5K4A6NMS3 321 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 A8MU76 341 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 LIN7AO14910 233 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 EFSO43281 561 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 KCNJ13O60928 360 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TNFSF15O95150 251 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 DLGAP3O95886 979 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 FTH1P02794 183 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ITGA2BP08514 1039 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 EBLN1P0CF75 366 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 MYBL2P10244 700 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RALBP11234 206 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ERGP11308 486 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PKMP14618 531 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ST6GAL1P15907 406 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PSMB5P28074 263 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 SSTR1P30872 391 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 EIF2S3P41091 472 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TTPAP49638 278 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 HSPA14Q0VDF9 509 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ABRQ12979 859 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PDIA2Q13087 525 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RPA4Q13156 261 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms