RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OR2AG2A6NM03 316 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF891A8MT65 544 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 MYO1CO00159 1063 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RNF103O00237 685 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TM9SF1O15321 606 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SPAG6O75602 509 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ERAL1O75616 437 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ABLIM3O94929 683 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 AGFG2O95081 481 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TPBGLP0DKB5 382 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 HOXD8P13378 290 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RPS9P46781 194 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ATXN1P54253 815 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PMS1P54277 932 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CLDN10P78369 228 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 EEF1A2Q05639 463 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SLC13A2Q13183 592 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 COL28A1Q2UY09 1125 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PDSS1Q5T2R2 415 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SLC8B1Q6J4K2 584 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SPRED2Q7Z698 418 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SNX32Q86XE0 403 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 XYLT1Q86Y38 959 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 UBE2J2Q8N2K1 259 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GPT2Q8TD30 523 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 BCAS4Q8TDM0 211 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GRAMD1AQ96CP6 724 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RNFT2Q96EX2 444 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC74BQ96LY2 380 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 OSBPL8Q9BZF1 889 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TTYH3Q9C0H2 523 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 EPB41L4BQ9H329 900 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 C6orf106Q9H6K1 298 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 MRM3Q9HC36 420 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 REV1Q9UBZ9 1251 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 KCND3Q9UK17 655 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHGC3Q9UN70 934 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CHTOPQ9Y3Y2 248 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NUP210Q8TEM1 1887 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC187A0A096LP49 1063 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 BHMG1C9JSJ3 638 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STMND1H3BQB6 276 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TAF4O00268 1085 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SIGLEC6O43699 453 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 IL33O95760 270 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 F11P03951 625 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 QDPRP09417 244 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ENO3P13929 434 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 EGR1P18146 543 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DGKAP23743 735 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RPL10P27635 214 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 HSD17B3P37058 310 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GGCXP38435 758 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 EIF2DP41214 584 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 KCNJ2P63252 427 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 UBE2IP63279 158 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MRPS22P82650 360 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CYP4F3Q08477 520 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ELAVL3Q14576 367 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 STK11Q15831 433 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CRY1Q16526 586 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PERM1Q5SV97 790 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 POMZP3Q6PJE2 187 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RANBP10Q6VN20 620 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CHSY3Q70JA7 882 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RHOUQ7L0Q8 258 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 HDDC2Q7Z4H3 204 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SNX20Q7Z614 316 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM151BQ8IW70 566 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR5T3Q8NGG3 340 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OR5M3Q8NGP4 307 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ABHD5Q8WTS1 349 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 PROX1Q92786 737 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MSLNLQ96KJ4 702 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 DHRS1Q96LJ7 313 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TAAR9Q96RI9 348 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GAL3ST4Q96RP7 486 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FEM1AQ9BSK4 669 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RPP25Q9BUL9 199 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RAB11FIP5Q9BXF6 653 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CAPS2Q9BXY5 557 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 WWP1Q9H0M0 922 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 GANQ9H2C0 597 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RAD21L1Q9H4I0 556 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 OSGEPQ9NPF4 335 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 RXFP3Q9NSD7 469 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TRHDEQ9UKU6 1024 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 NENFQ9UMX5 172 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 LCTP09848 1927 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 A0A087X0B3 334 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 SIGLEC16A6NMB1 481 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MAP2K7O14733 419 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 LIN7AO14910 233 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 CD3EAPO15446 510 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 B3GALT2O43825 422 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 TOP3BO95985 862 aaKnown RBP2.89□□□□□ -1.95
NEDD4-208ENST00000508342 ALBP02768 609 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 MT-ND5P03915 603 aa2.89□□□□□ -1.95
NEDD4-208ENST00000508342 FESP07332 822 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms