RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SLC22A18Q96BI1 424 aa4.37□□□□□ -1.71
DHFR-204ENST00000508282 MOCOSQ96EN8 888 aa4.37□□□□□ -1.71
DHFR-204ENST00000508282 ATOH8Q96SQ7 321 aa4.37□□□□□ -1.71
DHFR-204ENST00000508282 ASIC3Q9UHC3 531 aa4.37□□□□□ -1.71
DHFR-204ENST00000508282 NME7Q9Y5B8 376 aa4.37□□□□□ -1.71
DHFR-204ENST00000508282 ANKRD18BA2A2Z9 1011 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 TMEM221A6NGB7 291 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 H7C423 109 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 KLF11O14901 512 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 TOMM70O94826 608 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 OR2T7P0C7T2 308 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 PORP16435 677 aaPredicted RBP4.36□□□□□ -1.71
DHFR-204ENST00000508282 STAT2P52630 851 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 ITPRIPL2Q3MIP1 535 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 TMEM211Q6ICI0 200 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 STXBP4Q6ZWJ1 553 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 TMEM173Q86WV6 379 aaPredicted RBP4.36□□□□□ -1.71
DHFR-204ENST00000508282 CFAP206Q8IYR0 622 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 GUF1Q8N442 669 aaKnown RBP4.36□□□□□ -1.71
DHFR-204ENST00000508282 DCLK2Q8N568 766 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 LPGAT1Q92604 370 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 DYRK2Q92630 601 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 CALML4Q96GE6 196 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 SYT11Q9BT88 431 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 MCRIP2Q9BUT9 160 aaKnown RBP4.36□□□□□ -1.71
DHFR-204ENST00000508282 NUP85Q9BW27 656 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 TEX12Q9BXU0 123 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 ATP13A3Q9H7F0 1226 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 CACNG4Q9UBN1 327 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 LRWD1Q9UFC0 647 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 GPR34Q9UPC5 381 aa4.36□□□□□ -1.71
DHFR-204ENST00000508282 LOC100509620A0A075B734 347 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 A0A0J9YWU9 116 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 TSPAN1O60635 241 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 SORBS2O94875 1100 aaKnown RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 CLNS1AP54105 237 aaKnown RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 CUL4AQ13619 759 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 NTRK2Q16620 822 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 C15orf59Q2T9L4 293 aaPredicted RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 CTU2Q2VPK5 515 aaKnown RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 RILPL1Q5EBL4 403 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 XKR6Q5GH73 641 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 SPDYCQ5MJ68 293 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 RNASEH2BQ5TBB1 312 aaKnown RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 SPATA1Q5VX52 437 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 FAAP20Q6NZ36 180 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 GTSCR1Q86UQ5 136 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 MARVELD2Q8N4S9 558 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 ANKRD9Q96BM1 317 aaPredicted RBP4.35□□□□□ -1.71
DHFR-204ENST00000508282 TRIM15Q9C019 465 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 P2RY12Q9H244 342 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 SERINC1Q9NRX5 453 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 GIMAP4Q9NUV9 329 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 PAK5Q9P286 719 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 DAPK2Q9UIK4 370 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 PCDHGB4Q9UN71 923 aa4.35□□□□□ -1.71
DHFR-204ENST00000508282 MOCS3O95396 460 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 SAT1P21673 171 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 DNASE1P24855 282 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 COPB2P35606 906 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 CDH13P55290 713 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 XKR3Q5GH77 459 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 ZNF613Q6PF04 617 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 C16orf54Q6UWD8 224 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 LACC1Q8IV20 430 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 ZNF595Q8IYB9 648 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 ZNF440Q8IYI8 595 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 TAGAPQ8N103 731 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 LSMEM2Q8N112 164 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 OR8H2Q8N162 312 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 MINDY1Q8N5J2 469 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 MCUQ8NE86 351 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 OR11H4Q8NGC9 324 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 EXD1Q8NHP7 514 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
DHFR-204ENST00000508282 ZNF622Q969S3 477 aaKnown RBP eCLIP4.34□□□□□ -1.71
DHFR-204ENST00000508282 MAGED4Q96JG8 741 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 C18orf12Q96KH6 178 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 MS4A10Q96PG2 267 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 VGLL1Q99990 258 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 SYT15Q9BQS2 421 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 EQTNQ9NQ60 294 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 SLC35C2Q9NQQ7 365 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 FGF21Q9NSA1 209 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 TTLL3Q9Y4R7 772 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 PCDH11YQ9BZA8 1340 aa4.34□□□□□ -1.71
DHFR-204ENST00000508282 ANKRD61A6NGH8 418 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 DCXO43602 365 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 DFFBO76075 338 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 GFPT2O94808 682 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
DHFR-204ENST00000508282 SLC9A3P48764 834 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 HERV-K104P61576 105 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 KRT71Q3SY84 523 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 ELFN2Q5R3F8 820 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 BRINP3Q76B58 766 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 KIRREL3Q8IZU9 778 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms