RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CHRDQ9H2X0 955 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 KAT8Q9H7Z6 458 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 PRMT8Q9NR22 394 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 IMP3Q9NV31 184 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 TMLHEQ9NVH6 421 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 CPA4Q9UI42 421 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 SARDHQ9UL12 918 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 PPIL1Q9Y3C6 166 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
PDLIM5-210ENST00000508216 DENND3A2RUS2 1198 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 KBTBD13C9JR72 458 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 GRM8O00222 908 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 NKRFO15226 690 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PAK4O96013 591 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ALPLP05186 524 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 HOXB7P09629 217 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SBK2P0C263 348 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CCNYL3P0C7X3 344 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ARSBP15848 533 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MAT2AP31153 395 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CASP4P49662 377 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 GATMP50440 423 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 NR0B1P51843 470 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PLK1P53350 603 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MAPK10P53779 464 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 GDF10P55107 478 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 STARD6P59095 220 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 TRAF3Q13114 568 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 DGKZQ13574 1117 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 DRAP1Q14919 205 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PRPF38BQ5VTL8 546 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 IZUMO3Q5VZ72 239 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LIPJQ5W064 366 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZC3H14Q6PJT7 736 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 DPP8Q6V1X1 898 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PDZD4Q76G19 769 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 EPHX4Q8IUS5 362 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PSTKQ8IV42 348 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF654Q8IZM8 581 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CBR4Q8N4T8 237 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LRRC17Q8N6Y2 441 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MCPH1Q8NEM0 835 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 OR13C3Q8NGS6 347 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ROBO4Q8WZ75 1007 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CPT1BQ92523 772 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MTERF3Q96E29 417 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZC3HAV1LQ96H79 300 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LRFN5Q96NI6 719 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PAFAH2Q99487 392 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CDCA3Q99618 268 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 P2RY13Q9BPV8 354 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SOX7Q9BT81 388 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 RIMS4Q9H426 269 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ELOVL6Q9H5J4 265 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 TRPV4Q9HBA0 871 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 AGPAT4Q9NRZ5 378 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 F5H6K3 240 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PPP6CO00743 305 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PROM1O43490 865 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 GPX5O75715 221 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CRHP06850 196 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 USP17L8P0C7I0 530 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MLNP12872 115 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MUC1P15941 1255 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MYL9P24844 172 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 KLRC2P26717 231 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 RAD52P43351 418 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 VEPH1Q14D04 833 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 FAM98BQ52LJ0 330 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 HECTD3Q5T447 861 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 LIPNQ5VXI9 398 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CYP4F22Q6NT55 531 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 MZT2AQ6P582 158 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SHFQ7M4L6 423 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PLEKHH3Q7Z736 793 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 KIAA0895Q8NCT3 520 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ZNF669Q96BR6 464 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CENPNQ96H22 339 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 SDHCQ99643 169 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 DBNDD2Q9BQY9 259 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 INPP5KQ9BT40 448 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ACPTQ9BZG2 426 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 PCIF1Q9H4Z3 704 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ALG2Q9H553 416 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 GIMAP2Q9UG22 337 aa10.6□□□□□ -0.71
PDLIM5-210ENST00000508216 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms