RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DNAJA1P31689 397 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SOX6P35712 828 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 EIF2DP41214 584 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTGER3P43115 390 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAGEA2P43356 314 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GNPDA1P46926 289 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRPC1P48995 793 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ALDH7A1P49419 539 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CPT1AP50416 773 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF140P52738 457 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEC13P55735 322 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MTPNP58546 118 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC35A2P78381 396 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TEKQ02763 1124 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 EMX1Q04741 257 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PRKCDQ05655 676 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC10A7Q0GE19 358 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ABHD18Q0P651 414 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CSTF3Q12996 717 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLCA4Q14CN2 919 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIP4Q15650 581 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNJ8Q15842 424 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DDR2Q16832 855 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CTU2Q2VPK5 515 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TTLL9Q3SXZ7 439 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TIMM50Q3ZCQ8 353 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF404Q494X3 552 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 RUNDC3AQ59EK9 446 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 NOMO2Q5JPE7 1267 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TOR1AIP1Q5JTV8 583 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LDLRAP1Q5SW96 308 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 UBE2UQ5VVX9 321 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ALG1LQ6GMV1 187 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 OVOS1Q6IE37 1185 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PNCKQ6P2M8 343 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ENPP6Q6UWR7 440 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CERS6Q6ZMG9 384 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 AGMOQ6ZNB7 445 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAGE2Q7Z2X7 111 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GLT6D1Q7Z4J2 308 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MILR1Q7Z6M3 343 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DPP9Q86TI2 863 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LDB1Q86U70 411 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 HORMAD1Q86X24 394 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DCP2Q8IU60 420 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MMAAQ8IVH4 418 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZDHHC21Q8IVQ6 265 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CPNE9Q8IYJ1 553 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAF1Q8N7H5 531 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDYL2Q8N8U2 506 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF540Q8NDQ6 660 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ARRDC2Q8TBH0 407 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DNAJB3Q8WWF6 145 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 RASSF5Q8WWW0 418 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATL1Q8WXF7 558 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PROX1Q92786 737 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC38A4Q969I6 547 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LGALS12Q96DT0 336 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 LINGO1Q96FE5 620 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCARF2Q96GP6 870 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF419Q96HQ0 510 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TEX37Q96LM6 180 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF300Q96RE9 604 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 CAMKK2Q96RR4 588 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZIC5Q96T25 663 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GPR21Q99679 349 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SEMA3CQ99985 751 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLX1AQ9BQ83 275 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPATA9Q9BWV2 254 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ADGRE3Q9BY15 652 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ITPAQ9BY32 194 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 AMBRA1Q9C0C7 1298 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR2B2Q9GZK3 357 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KATNBL1Q9H079 304 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAGEH1Q9H213 219 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNH6Q9H252 994 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 DSN1Q9H410 356 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PIF1Q9H611 641 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRPV5Q9NQA5 729 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MPP6Q9NZW5 540 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIF17Q9P2E2 1029 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GALPQ9UBC7 116 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRPS1Q9UHF7 1281 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ENOPH1Q9UHY7 261 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 EIF2B4Q9UI10 523 aaKnown RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 OSGIN1Q9UJX0 560 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 GDF2Q9UK05 429 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 NUDT5Q9UKK9 219 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MKLN1Q9UL63 735 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 FZD1Q9UP38 647 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAPRE3Q9UPY8 281 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCML2Q9UQR0 700 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 POLR3HQ9Y535 204 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCDHB1Q9Y5F3 818 aa4.86□□□□□ -1.63
HMGB3P16-201ENST00000508037 ILVBLA1L0T0 632 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms