RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SPATA33Q96N06 139 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 CTAGE1Q96RT6 745 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 MYADMQ96S97 322 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 INTS14Q96SY0 518 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 RAD9AQ99638 391 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 RTP3Q9BQQ7 232 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 KATNB1Q9BVA0 655 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 S1PR5Q9H228 398 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 DNAJB9Q9UBS3 223 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 DAPK2Q9UIK4 370 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 KCNG2Q9UJ96 466 aa3.2□□□□□ -1.9
LSM6-205ENST00000507449 FAF1Q9UNN5 650 aaPredicted RBP3.2□□□□□ -1.9
LSM6-205ENST00000507449 FLT1P17948 1338 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 TRAV34A0A0B4J273 112 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 DENND3A2RUS2 1198 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ANXA2P2A6NMY6 339 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 FAM86B1E9PN63 330 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 RNASEH1O60930 286 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 RPN1P04843 607 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 F7P08709 466 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 FAM86B2P0C5J1 330 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 HSPA8P11142 646 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 ADRA2CP18825 462 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 JAK1P23458 1154 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 CDC25CP30307 473 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 CRKLP46109 303 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 DVL1P1P54792 670 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 CLDN15P56746 228 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 RPS18P62269 152 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 BFSP1Q12934 665 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 CUL3Q13618 768 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ZRSR1Q15695 479 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 UGP2Q16851 508 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 UGT3A2Q3SY77 523 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ZNF672Q499Z4 452 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 LBHQ53QV2 105 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 ASPRV1Q53RT3 343 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 TCTE1Q5JU00 501 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 DCAF10Q5QP82 559 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ELFN2Q5R3F8 820 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 SHQ1Q6PI26 577 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 MFSD6Q6ZSS7 791 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ADCK2Q7Z695 626 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 METTL23Q86XA0 190 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 OR8H3Q8N146 312 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 THAP8Q8NA92 274 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 OR1J1Q8NGS3 322 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 FCAMRQ8WWV6 532 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 MR1Q95460 341 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 SPATA17Q96L03 361 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 RMDN2Q96LZ7 410 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 FAM20AQ96MK3 541 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 FNBP1Q96RU3 617 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 PSD2Q9BQI7 771 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 TRMT61BQ9BVS5 477 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 SLC2A11Q9BYW1 496 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 LAT2Q9GZY6 243 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 Q9H8V8 135 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 CDH20Q9HBT6 801 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ZBTB20Q9HC78 741 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 POLLQ9UGP5 575 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 CPSF3Q9UKF6 684 aaKnown RBP3.19□□□□□ -1.9
LSM6-205ENST00000507449 ACAD8Q9UKU7 415 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 WDR83OSQ9Y284 106 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 TMED3Q9Y3Q3 217 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 JRKLQ9Y4A0 524 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 POMT1Q9Y6A1 747 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 HEG1Q9ULI3 1381 aa3.19□□□□□ -1.9
LSM6-205ENST00000507449 ENO4A6NNW6 628 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 BMPR1BO00238 502 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PLOD2O00469 737 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SLC7A4O43246 635 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SIX3O95343 332 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 GBAP04062 536 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 NR3C1P04150 777 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 ZFYP08048 801 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 FAM58BPP0C7Q3 252 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 FGF5P12034 268 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PDGFRAP16234 1089 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 EPCAMP16422 314 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 CA4P22748 312 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 CD27P26842 260 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 HOXC13P31276 330 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 NR2C2P49116 596 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 GMPSP49915 693 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 TERF1P54274 439 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 GAS1P54826 345 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 PTENP60484 403 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 LGALS3BPQ08380 585 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 DMP1Q13316 513 aaPredicted RBP3.18□□□□□ -1.9
LSM6-205ENST00000507449 TUBB2AQ13885 445 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 VEZF1Q14119 521 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 ITPRIPL2Q3MIP1 535 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 MCMDC2Q4G0Z9 681 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 ZRANB3Q5FWF4 1079 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 TECRLQ5HYJ1 363 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 WDR38Q5JTN6 314 aa3.18□□□□□ -1.9
LSM6-205ENST00000507449 SPATA19Q7Z5L4 167 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms