RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SPATA6LQ8N4H0 392 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 OR9A1PQ8NGU1 263 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 HMGCLL1Q8TB92 370 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 RSC1A1Q92681 617 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 GFM1Q96RP9 751 aaKnown RBP12.46□□□□□ -0.41
TCOF1-210ENST00000506767 PKP4Q99569 1192 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 DPYSL5Q9BPU6 564 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 ABCG4Q9H172 646 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 SRMSQ9H3Y6 488 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 XKR8Q9H6D3 395 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 SPATA7Q9P0W8 599 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 PDP2Q9P2J9 529 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 EPHA6Q9UF33 1036 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 TBK1Q9UHD2 729 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 LGALS13Q9UHV8 139 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 TLK1Q9UKI8 766 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-210ENST00000506767 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
TCOF1-210ENST00000506767 NCOR2Q9Y618 2525 aa12.46□□□□□ -0.42
TCOF1-210ENST00000506767 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 KRT87PA6NCN2 255 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 D6RAR5 112 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 BTN3A1O00481 513 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 KLHL2O95198 593 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 C9P02748 559 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 COL6A2P12110 1019 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 HOXB3P14651 431 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 TYRP1P17643 537 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CYP2A7P20853 494 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 MAP4P27816 1152 aaKnown RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 PDX1P52945 283 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 ZNF844Q08AG5 666 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 IFFO1Q0D2I5 559 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 SPIDRQ14159 915 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 ARHGAP19Q14CB8 494 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 TSNQ15631 228 aaKnown RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CYP2A13Q16696 494 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 AMZ1Q400G9 498 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 TAF1BQ53T94 588 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CCDC157Q569K6 752 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 TMEM71Q6P5X7 295 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 KLHL35Q6PF15 583 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 USP53Q70EK8 1073 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 RAB44Q7Z6P3 723 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CLEC14AQ86T13 490 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 TBC1D1Q86TI0 1168 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 ISCA2Q86U28 154 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 PLD6Q8N2A8 252 aaKnown RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 OR2L8Q8NGY9 312 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 MCOLN3Q8TDD5 553 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 ACMSDQ8TDX5 336 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 KCTD4Q8WVF5 259 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 NCSTNQ92542 709 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 KIAA1191Q96A73 305 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 PTERQ96BW5 349 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 NXNL1Q96CM4 212 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 AHCYL2Q96HN2 611 aaKnown RBP12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CABS1Q96KC9 395 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 GPR78Q96P69 363 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 ZIM3Q96PE6 472 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 NUDT22Q9BRQ3 303 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 RAB11FIP5Q9BXF6 653 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 VPS11Q9H270 941 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 RDH14Q9HBH5 336 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 NMRAL1Q9HBL8 299 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 HRASLS2Q9NWW9 162 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 CIDEBQ9UHD4 219 aa12.45□□□□□ -0.42
TCOF1-210ENST00000506767 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 A0A1W2PPM1 405 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CCDC189A1A4V9 331 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 SMIM23A6NLE4 172 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 PRICKLE3O43900 615 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 SLC16A8O95907 504 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 MT-CO3P00414 261 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CHRM5P08912 532 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 HSD17B2P37059 387 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 KCNC1P48547 511 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 AP1S2P56377 157 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CDKL1Q00532 357 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 ACAP2Q15057 778 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 ADAMTSL2Q86TH1 951 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 OOSP2Q86WS3 158 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 PLXDC1Q8IUK5 500 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 SLITRK4Q8IW52 837 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 LRRC56Q8IYG6 542 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-210ENST00000506767 LINC01555Q8NAE3 123 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 OR4D9Q8NGE8 314 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 FLVCR1-AS1Q8TAF5 88 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CCDC138Q96M89 665 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
TCOF1-210ENST00000506767 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms