RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 B8ZZF3 427 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 FKTNO75072 461 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 ECI2O75521 394 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 SLITRK5O94991 958 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LCKP06239 509 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 DBTP11182 482 aaKnown RBP15.56■□□□□ 0.08
SCLT1-208ENST00000506368 PFKLP17858 780 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CD9P21926 228 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LIPAP38571 399 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LIMK1P53667 647 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 SEMA3AQ14563 771 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 RBBP7Q16576 425 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 MAPKAPK3Q16644 382 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 LRRC26Q2I0M4 334 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 Q6ZSR9 355 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 ADAMTSL2Q86TH1 951 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 P3H2Q8IVL5 708 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CLIP3Q96DZ5 547 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 CEP19Q96LK0 163 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 RAD9AQ99638 391 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 SLC30A2Q9BRI3 323 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 SLC39A8Q9C0K1 460 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 EXD2Q9NVH0 621 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 NEU3Q9UQ49 428 aa15.56■□□□□ 0.08
SCLT1-208ENST00000506368 NUP205Q92621 2012 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 E9PQ18 207 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 TRIM3O75382 744 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ERN1O75460 977 aaKnown RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 BEST1O76090 585 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 SLC25A27O95847 323 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 IL7P13232 177 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PRKACGP22612 351 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 KRT20P35900 424 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 SIM2Q14190 667 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PIK3R6Q5UE93 754 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 OR2T5Q6IEZ7 315 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 CALHM3Q86XJ0 350 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ABI1Q8IZP0 508 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 CACTIN-AS1Q8N1I8 211 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 OR2T29Q8NH02 315 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 GTF2H4Q92759 462 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 NCLNQ969V3 563 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ACTL8Q9H568 366 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 DYRK4Q9NR20 520 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ACOXLQ9NUZ1 547 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 CRYL1Q9Y2S2 319 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PTCH2Q9Y6C5 1203 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 SEMA3DO95025 777 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 CCNDBP1O95273 360 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 SLC4A1P02730 911 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 G6PDP11413 515 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 KCNE1P15382 129 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 CYP2A7P20853 494 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ERP29P30040 261 aaKnown RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 MAP3K7CLP57077 242 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 RIPPLY1Q0D2K3 151 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 EIF4HQ15056 248 aaKnown RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ARMCX4Q5H9R4 360 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 MANEALQ5VSG8 457 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PLEKHH3Q7Z736 793 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 GATAD2AQ86YP4 633 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PLCZ1Q86YW0 608 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ZDHHC21Q8IVQ6 265 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ELMOD2Q8IZ81 293 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 PGBD3Q8N328 593 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 C9orf43Q8TAL5 461 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 RNF34Q969K3 372 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ZNF419Q96HQ0 510 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-208ENST00000506368 COPS4Q9BT78 406 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ZBED2Q9BTP6 218 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 MROH8Q9H579 483 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 RUBCNLQ9H714 662 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 C1orf109Q9NX04 203 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ADPRHL2Q9NX46 363 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 ASIC5Q9NY37 505 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 VPS9D1Q9Y2B5 631 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 MCM3APO60318 1980 aa15.55■□□□□ 0.08
SCLT1-208ENST00000506368 WASH4PA8MWX3 477 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 M0R082 166 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 CCRL2O00421 344 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 SERPINA1P01009 418 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 NCF1P14598 390 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 CD72P21854 359 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 GADD45AP24522 165 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 DAPP51397 102 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 NRG1Q02297 640 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 PRKCZQ05513 592 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 CEP78Q5JTW2 689 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 TIGD3Q6B0B8 471 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 NOTUMQ6P988 496 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 AHSA2Q719I0 299 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 ZNF767PQ75MW2 155 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 KRT73Q86Y46 540 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 PLPP6Q8IY26 295 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 FUBP1Q96AE4 644 aaKnown RBP15.54■□□□□ 0.08
SCLT1-208ENST00000506368 PYCR2Q96C36 320 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 RNF170Q96K19 258 aa15.54■□□□□ 0.08
SCLT1-208ENST00000506368 COL21A1Q96P44 957 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms