RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RAB40ALP0C0E4 278 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 OR52Z1P0C646 297 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 PATE4P0C8F1 98 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CFC1P0CG37 223 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CYP11B2P19099 503 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CA4P22748 312 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 EEF1DP29692 281 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 RAB28P51157 221 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 POLR2LP62875 67 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 TUBB4BP68371 445 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 MAT1AQ00266 395 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 RBPJQ06330 500 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF415Q09FC8 603 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 HYAL1Q12794 435 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 TCP11X2Q5H9J9 407 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 C1orf141Q5JVX7 400 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 NUP54Q7Z3B4 507 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 ISCA2Q86U28 154 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 KBTBD8Q8NFY9 601 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 OR11H4Q8NGC9 324 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 CCDC107Q8WV48 283 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 ATL1Q8WXF7 558 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 VPS33AQ96AX1 596 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 HES6Q96HZ4 224 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 RADILQ96JH8 1075 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 F2RL3Q96RI0 385 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 FNBP1Q96RU3 617 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 ST6GALNAC4Q9H4F1 302 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 SIX2Q9NPC8 291 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 ZDHHC2Q9UIJ5 367 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 KCNJ14Q9UNX9 436 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 C2CD2Q9Y426 696 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 RPS6KL1Q9Y6S9 549 aa3.68□□□□□ -1.82
TOPBP1-204ENST00000505804 LOC101059948A0A1B0GTJ6 334 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ANKRD61A6NGH8 418 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 A8MXE2 369 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 PTGESO14684 152 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ATP6V0E1O15342 81 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 C22orf31O95567 290 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 PRSS56P0CW18 603 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 EFNA1P20827 205 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ACHEP22303 614 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 TCEA1P23193 301 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 AZGP1P25311 298 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CHRNB4P30926 498 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 HOXC8P31273 242 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 MAP2K2P36507 400 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 MNDAP41218 407 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ACSM1Q08AH1 577 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CAMK2DQ13557 499 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CA9Q16790 459 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 SPDYCQ5MJ68 293 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ELFN2Q5R3F8 820 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CST9LP1Q5W188 147 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 KRT39Q6A163 491 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 PRR27Q6MZM9 219 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 C11orf63Q6NUN7 778 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 ZNF449Q6P9G9 518 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 C15orf39Q6ZRI6 1047 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 RTN4RL2Q86UN3 420 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 EID3Q8N140 333 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 PI4KAP1Q8N8J0 262 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CNBD1Q8NA66 436 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 THAP8Q8NA92 274 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 MRPS27Q92552 414 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 THOC1Q96FV9 657 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CFAP57Q96MR6 1250 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 FEVQ99581 238 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 RAD9AQ99638 391 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 BAG1Q99933 345 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 NUP85Q9BW27 656 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 TXLNGQ9NUQ3 528 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CACNG4Q9UBN1 327 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CFDP1Q9UEE9 299 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CPSF3Q9UKF6 684 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 GAB2Q9UQC2 676 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 CCL27Q9Y4X3 112 aa3.67□□□□□ -1.82
TOPBP1-204ENST00000505804 A0A1W2PN81 502 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 SOCS5O75159 536 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 ACSL3O95573 720 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 PLGP00747 810 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 FYNP06241 537 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 ATP5BP06576 529 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 APOA4P06727 396 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 ITGA3P26006 1051 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 CHRNA7P36544 502 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 PRKCZQ05513 592 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 UGP2Q16851 508 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 KRBOX4Q5JUW0 171 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 SH2D5Q6ZV89 423 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 DET1Q7L5Y6 550 aa3.66□□□□□ -1.82
TOPBP1-204ENST00000505804 NUDT13Q86X67 352 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms