RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 DEDD2Q8WXF8 326 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 HEXIM2Q96MH2 286 aaKnown RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 SMPD4Q9NXE4 827 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 SLAMF8Q9P0V8 285 aa13.03□□□□□ -0.32
LETM1-203ENST00000505551 LEF1Q9UJU2 399 aaPredicted RBP13.03□□□□□ -0.32
LETM1-203ENST00000505551 MMP3P08254 477 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 SERPINF2P08697 491 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 ICAM2P13598 275 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 TSPAN8P19075 237 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 GGT1P19440 569 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 PTPN3P26045 913 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 DCTP40126 519 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 PIK3CBP42338 1070 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 PPP3CCP48454 512 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 GZMKP49863 264 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 GBX1Q14549 363 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 RPS6KA2Q15349 733 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 KIAA0319Q5VV43 1072 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 CAPN13Q6MZZ7 669 aaPredicted RBP13.02□□□□□ -0.32
LETM1-203ENST00000505551 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 C12orf29Q8N999 325 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 ZNF540Q8NDQ6 660 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 UCK2Q9BZX2 261 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 KLK14Q9P0G3 267 aa13.02□□□□□ -0.32
LETM1-203ENST00000505551 LAMA2P24043 3122 aaKnown RBP13.02□□□□□ -0.33
LETM1-203ENST00000505551 PDGFAP04085 211 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ACADMP11310 421 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ZNF30P17039 623 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 TPH1P17752 444 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 AKAP5P24588 427 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 TALDO1P37837 337 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 GNPDA1P46926 289 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 BCAT1P54687 386 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 LRRC74AQ0VAA2 488 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 CTBP1Q13363 440 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 SMAD4Q13485 552 aaKnown RBP13.02□□□□□ -0.33
LETM1-203ENST00000505551 SYT16Q17RD7 645 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ZNF678Q5SXM1 525 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 FAM171BQ6P995 826 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.33
LETM1-203ENST00000505551 TTLQ8NG68 377 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 OR4M2Q8NGB6 313 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 OR10T2Q8NGX3 314 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 BLOC1S5Q8TDH9 187 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 TWIST2Q8WVJ9 160 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ITCHQ96J02 903 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ACOX2Q99424 681 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 NIPAL2Q9H841 368 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 NMRK2Q9NPI5 230 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 AASSQ9UDR5 926 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 TSPAN16Q9UKR8 245 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 TMPRSS11EQ9UL52 423 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 AP3M1Q9Y2T2 418 aa13.02□□□□□ -0.33
LETM1-203ENST00000505551 KCNK1O00180 336 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 PPEF2O14830 753 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 HCRTO43612 131 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 GREM1O60565 184 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 FGF18O76093 207 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 FGF4P08620 206 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 HGFP14210 728 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 EFNA1P20827 205 aaPredicted RBP13.01□□□□□ -0.33
LETM1-203ENST00000505551 LIMK1P53667 647 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 POU4F1Q01851 419 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 IRF3Q14653 427 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 DDR2Q16832 855 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 UNC50Q53HI1 259 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 HPDLQ96IR7 371 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 TEX37Q96LM6 180 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 TM9SF2Q99805 663 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 DPEP3Q9H4B8 488 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 ERVW-1Q9UQF0 538 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 TMEM5Q9Y2B1 443 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 AUP1Q9Y679 476 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 COL1A2P08123 1366 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 M0R082 166 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 NPPAP01160 153 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 ZNF3P17036 446 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 PRKACGP22612 351 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 SH3BP2P78314 561 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 GRIK2Q13002 908 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 KEAP1Q14145 624 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 SEMA3AQ14563 771 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 DUSP28Q4G0W2 176 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 PRSS36Q5K4E3 855 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 SHEQ5VZ18 495 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 ENPP6Q6UWR7 440 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 NECAB2Q7Z6G3 386 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 EID3Q8N140 333 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 CCDC115Q96NT0 180 aa13.01□□□□□ -0.33
LETM1-203ENST00000505551 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms