RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CDKL1Q00532 357 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TAP2Q03519 686 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ABRQ12979 859 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SP140Q13342 867 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 FASTKQ14296 549 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 MAP9Q49MG5 647 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 AASDHQ4L235 1098 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TTMPQ5BVD1 217 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CDCP2Q5VXM1 449 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CES4AQ5XG92 561 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 UGT3A1Q6NUS8 523 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CCDC91Q7Z6B0 441 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SLITRK4Q8IW52 837 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 DCUN1D3Q8IWE4 304 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 NKAPQ8N5F7 415 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OR2A1Q8NGT9 310 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 RHBDD1Q8TEB9 315 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ZNF480Q8WV37 535 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 WNT2BQ93097 391 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CCDC74AQ96AQ1 378 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PPM1MQ96MI6 270 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OR4K3Q96R72 315 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TMEM79Q9BSE2 394 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PITPNM3Q9BZ71 974 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 MVB12BQ9H7P6 319 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TMBIM4Q9HC24 238 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SYTL2Q9HCH5 934 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ENAMQ9NRM1 1142 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 IMP3Q9NV31 184 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SPHK1Q9NYA1 384 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TMEM9Q9P0T7 183 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 LRIT1Q9P2V4 623 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 EPHA6Q9UF33 1036 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TRMT6Q9UJA5 497 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ASF1AQ9Y294 204 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ACOT9Q9Y305 439 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OARD1Q9Y530 152 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PCDHGA1Q9Y5H4 931 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 KLK4Q9Y5K2 254 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 A0A087X1B8 175 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 IQANK1A0A1B0GTG1 560 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 A0A1B0GTL3 188 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CCDC189A1A4V9 331 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 FAM221BA6H8Z2 402 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PDZK1P1A8MUH7 402 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 GOLGA8RI6L899 631 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 BTN3A1O00481 513 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TNFSF14O43557 240 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 HCRTR1O43613 425 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 NRP2O60462 931 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 KERAO60938 352 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ERLIN1O75477 346 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 KRT37O76014 449 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PROCP04070 461 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 MPOP05164 745 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 LTA4HP09960 611 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CEACAM1P13688 526 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 KRT4P19013 534 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SAT1P21673 171 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ARRB2P32121 409 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CRHR1P34998 444 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CAPZBP47756 277 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 GABRA4P48169 554 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 RAB28P51157 221 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ATXN3P54252 364 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 EPHA4P54764 986 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OR1D5P58170 312 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ATP6V0D1P61421 351 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 INSM1Q01101 510 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ZFP36L1Q07352 338 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PCDH1Q08174 1060 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PRKG2Q13237 762 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CSHL1Q14406 222 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ACAP2Q15057 778 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 C18orf21Q32NC0 220 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TTLL9Q3SXZ7 439 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 LRRC8EQ6NSJ5 796 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ARHGAP22Q7Z5H3 698 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ALYREFQ86V81 257 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 DEFB124Q8NES8 71 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OR56A3Q8NH54 315 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 JPH3Q8WXH2 748 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ZBTB9Q96C00 473 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TSPAN17Q96FV3 270 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 OR2A14Q96R47 310 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PKP4Q99569 1192 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SGPP1Q9BX95 441 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TSSK1BQ9BXA7 367 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 C1QTNF3Q9BXJ4 246 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CCDC68Q9H2F9 335 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms