RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZWILCHQ9H900 591 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 RASSF1Q9NS23 344 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 NXT1Q9UKK6 140 aaKnown RBP11.98□□□□□ -0.49
LSM6-204ENST00000504181 ZNF711Q9Y462 761 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 ASB1Q9Y576 335 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 ANK2Q01484 3957 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 H3BRJ5 948 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 BIN1O00499 593 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 GPR39O43194 453 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 ATE1O95260 518 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 POLBP06746 335 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 CES1P23141 567 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 PSMA2P25787 234 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 RAB28P51157 221 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 ZNF33BQ06732 778 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 KLC1Q07866 573 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 SNTB1Q13884 538 aaKnown RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 KEAP1Q14145 624 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 KLHDC7AQ5VTJ3 777 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 NDUFAF7Q7L592 441 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 DET1Q7L5Y6 550 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 PHF13Q86YI8 300 aaPredicted RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 SIAH3Q8IW03 269 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 ADGRF3Q8IZF5 1079 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 CIARTQ8N365 385 aaPredicted RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 NAT14Q8WUY8 206 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
LSM6-204ENST00000504181 COX4I2Q96KJ9 171 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 FERD3LQ96RJ6 166 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 ZCCHC2Q9C0B9 1178 aaKnown RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 RBM22Q9NW64 420 aaKnown RBP eCLIP11.97□□□□□ -0.49
LSM6-204ENST00000504181 ACSL5Q9ULC5 683 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
LSM6-204ENST00000504181 ARID1AO14497 2285 aa11.97□□□□□ -0.49
LSM6-204ENST00000504181 HLA-DQB2P05538 268 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 UCHL3P15374 230 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 UGT2B7P16662 529 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 ARL4AP40617 200 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 CD86P42081 329 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 GCGRP47871 477 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 OR1D4P47884 311 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 CARSP49589 748 aaKnown RBP11.96□□□□□ -0.49
LSM6-204ENST00000504181 ZNF165P49910 485 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 ST13P50502 369 aaKnown RBP11.96□□□□□ -0.49
LSM6-204ENST00000504181 CLEC16AQ2KHT3 1053 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 ATG9BQ674R7 924 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 TXNRD3NBQ6F5E7 133 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 AMIGO1Q86WK6 493 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 DTWD1Q8N5C7 304 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 CPSF7Q8N684 471 aaKnown RBP11.96□□□□□ -0.49
LSM6-204ENST00000504181 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.49
LSM6-204ENST00000504181 OR52E1Q8NGJ3 308 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 RND1Q92730 232 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 RBM41Q96IZ5 413 aaKnown RBP11.96□□□□□ -0.49
LSM6-204ENST00000504181 FRMD6Q96NE9 622 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 ADGRE3Q9BY15 652 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 GDPD2Q9HCC8 539 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 PLCL2Q9UPR0 1127 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 HEBP2Q9Y5Z4 205 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 MAU2Q9Y6X3 613 aa11.96□□□□□ -0.49
LSM6-204ENST00000504181 ASPDHA6ND91 283 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 MGAT4DA6NG13 374 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 VSTM2BA6NLU5 285 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 H7C1Q1 480 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 DSCR3O14972 297 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 ONECUT2O95948 504 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 MMP2P08253 660 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 EEF1DP29692 281 aaKnown RBP11.95□□□□□ -0.5
LSM6-204ENST00000504181 MIPP30301 263 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 SERPINB6P35237 376 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 ARSEP51690 589 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
LSM6-204ENST00000504181 ARSFP54793 590 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 DLX5P56178 289 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 NKX6-1P78426 367 aaPredicted RBP11.95□□□□□ -0.5
LSM6-204ENST00000504181 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 NLRP9Q7RTR0 991 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 DAAM2Q86T65 1068 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 RPRMLQ8N4K4 120 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 OR2L2Q8NH16 312 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 SIGLEC12Q96PQ1 595 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 TAS2R14Q9NYV8 317 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
LSM6-204ENST00000504181 C3orf18Q9UK00 162 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 HRH3Q9Y5N1 445 aa11.95□□□□□ -0.5
LSM6-204ENST00000504181 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 AURKAO14965 403 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A9O60656 530 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A6P19224 532 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A1P22309 533 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 PTGER1P34995 402 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms