RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IL1RL2Q9HB29 575 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 ASIC5Q9NY37 505 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 ZNHIT2Q9UHR6 403 aa20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 POLR3HQ9Y535 204 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-216ENST00000503742 DYTNA2CJ06 578 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 NME4O00746 187 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 NPC1O15118 1278 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC2A4P14672 509 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC6A2P23975 617 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 MAP4P27816 1152 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 PDHA2P29803 388 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 GNPDA1P46926 289 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 RPL38P63173 70 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 MRPS22P82650 360 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 MAD2L1Q13257 205 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 CPSF6Q16630 551 aaKnown RBP eCLIP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC15A3Q8IY34 581 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 FOXJ1Q92949 421 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 LINC00615Q96LM1 132 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 CCDC138Q96M89 665 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 ATG10Q9H0Y0 220 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 PCDHAC1Q9H158 963 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 RSPH9Q9H1X1 276 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 ATXN10Q9UBB4 475 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 LEF1Q9UJU2 399 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 GRXCR2A6NFK2 248 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 LIN7AO14910 233 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 CASQ2O14958 399 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 CATP04040 527 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 JAK1P23458 1154 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 ITPKAP23677 461 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 DLX2Q07687 328 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 SGO1Q5FBB7 561 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 C6orf10Q5SRN2 563 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 NUDT18Q6ZVK8 323 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 LRTM1Q9HBL6 345 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 BATF3Q9NR55 127 aa20.79■□□□□ 0.92
UBE2D3-216ENST00000503742 KIF1CO43896 1103 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 PDYNP01213 254 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 PBLDP30039 288 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 CAMK2GQ13555 558 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 CCSMST1Q4G0I0 132 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 ZNF547Q8IVP9 402 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 AADATQ8N5Z0 425 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 ATL1Q8WXF7 558 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 ZNF514Q96K75 400 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 ACPTQ9BZG2 426 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 CMTM6Q9NX76 183 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 STOX2Q9P2F5 926 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 SNX6Q9UNH7 406 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 EIF3LQ9Y262 564 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 PCDHA9Q9Y5H5 950 aa20.78■□□□□ 0.92
UBE2D3-216ENST00000503742 SERTM1A2A2V5 107 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 AP1G1O43747 822 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 RSL1D1O76021 490 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 TAS2R38P59533 333 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 YBX1P67809 324 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 CAPRIN1Q14444 709 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 IMPG1Q17R60 797 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 SPATS1Q496A3 300 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 TIGD2Q4W5G0 525 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 SLC44A4Q53GD3 710 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 AGBL4Q5VU57 503 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 GALNT13Q8IUC8 556 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 PQLC1Q8N2U9 271 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 DPP10Q8N608 796 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 FBXO15Q8NCQ5 510 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 COX14Q96I36 57 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 MAGEB10Q96LZ2 347 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 ZNF184Q99676 751 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 INTS7Q9NVH2 962 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 C1orf109Q9NX04 203 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 C6orf203Q9P0P8 240 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 EPS15L1Q9UBC2 864 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 GPR34Q9UPC5 381 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 C17orf113A0A1B0GUU1 675 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 NPIPB8E9PQR5 432 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 H3BM21 787 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 IFRD1O00458 451 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 MID1O15344 667 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 VEGFDO43915 354 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 C8BP07358 591 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 HSD17B1P14061 328 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 PRPH2P23942 346 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 WASP42768 502 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 BDKRB1P46663 353 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 SOX9P48436 509 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 ATXN3P54252 364 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 NFYCQ13952 458 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 KIAA0040Q15053 153 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 CST6Q15828 149 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 C2orf27AQ580R0 203 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 AGTRAPQ6RW13 159 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 TRAPPC5Q8IUR0 188 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 CFAP206Q8IYR0 622 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 CHPFQ8IZ52 775 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 PLA2G15Q8NCC3 412 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 SELENOMQ8WWX9 145 aa20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 MTFMTQ96DP5 389 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-216ENST00000503742 FOPNLQ96NB1 174 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms