RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PKLRP30613 574 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 SHMT2P34897 504 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 CCNFP41002 786 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 SEPHS1P49903 392 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 RAB28P51157 221 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 PRKAA1Q13131 559 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 ARMC6Q6NXE6 501 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 WDR93Q6P2C0 686 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-205ENST00000503401 SPATA6LQ8N4H0 392 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 LINC01555Q8NAE3 123 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 UBLCP1Q8WVY7 318 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-205ENST00000503401 RAD51AP1Q96B01 352 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 DPYSL5Q9BPU6 564 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 STRADBQ9C0K7 418 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 PDP2Q9P2J9 529 aa15.98■□□□□ 0.15
SCLT1-205ENST00000503401 TRABD2BA6NFA1 517 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 EIF3FO00303 357 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RASGRF2O14827 1237 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 INHBAP08476 426 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 CHRM5P08912 532 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 STMN1P16949 149 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 KPNA2P52292 529 aaKnown RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RAB11FIP2Q7L804 512 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 MAGEC3Q8TD91 643 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 DENND1AQ8TEH3 1009 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 TSPAN17Q96FV3 270 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ZDHHC12Q96GR4 267 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 PKP4Q99569 1192 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 MAP3K3Q99759 626 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RAB33BQ9H082 229 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ACTR10Q9NZ32 417 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 EPHA6Q9UF33 1036 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 IGHV5-51A0A0C4DH38 117 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ZBTB14O43829 449 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 WISP3O95389 354 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 MAP4P27816 1152 aaKnown RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 GCAP28676 217 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 PEBP1P30086 187 aaKnown RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 MSH2P43246 934 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RAB10P61026 200 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 FASTKQ14296 549 aaKnown RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ZKSCAN8Q15776 578 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 CACHD1Q5VU97 1274 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 LRRC8EQ6NSJ5 796 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 MBOAT1Q6ZNC8 495 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RAPH1Q70E73 1250 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ARHGAP22Q7Z5H3 698 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 RASGRP3Q8IV61 690 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 FAM20CQ8IXL6 584 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 OR9A1PQ8NGU1 263 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 AENQ8WTP8 325 aaKnown RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 DCAKDQ8WVC6 231 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 LIN37Q96GY3 246 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-205ENST00000503401 POPDC3Q9HBV1 291 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 SYTL2Q9HCH5 934 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 OR6C2Q9NZP2 312 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 LOXL2Q9Y4K0 774 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 IKBKGQ9Y6K9 419 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 LAMA5O15230 3695 aa15.97■□□□□ 0.15
SCLT1-205ENST00000503401 ADAMTS20P59510 1910 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 CCDC187A0A096LP49 1063 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 PIPSLA2A3N6 862 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 NPEPPSL1A6NEC2 478 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 TMX2-CTNND1H3BSU7 103 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 MYO1CO00159 1063 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 CDC7O00311 574 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 KDM1AO60341 852 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 SHBGP04278 402 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 ITIH1P19827 911 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 PRDX3P30048 256 aaKnown RBP15.96■□□□□ 0.15
SCLT1-205ENST00000503401 GABREP78334 506 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 ILF2Q12905 390 aaKnown RBP15.96■□□□□ 0.15
SCLT1-205ENST00000503401 PHKG1Q16816 387 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 TRIM73Q86UV7 250 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 FBXO39Q8N4B4 442 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 NKAPQ8N5F7 415 aaKnown RBP15.96■□□□□ 0.15
SCLT1-205ENST00000503401 GRAMD1AQ96CP6 724 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 KLHL25Q9H0H3 589 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 OCIAD1Q9NX40 245 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 POMT2Q9UKY4 750 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 PDE10AQ9Y233 779 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 ZFHX4Q86UP3 3567 aa15.96■□□□□ 0.15
SCLT1-205ENST00000503401 C2orf74A8MZ97 194 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 ISM1B1AKI9 464 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 SLC16A8O95907 504 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 C8GP07360 202 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 SLC35E2BP0CK96 405 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 CCDC166P0CW27 439 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 CCL4P13236 92 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 UGT2B7P16662 529 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 CSTF2P33240 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCLT1-205ENST00000503401 LSSP48449 732 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 TRA2AQ13595 282 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCLT1-205ENST00000503401 FAM129CQ86XR2 697 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 PPFIBP2Q8ND30 876 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 OR2L8Q8NGY9 312 aa15.95■□□□□ 0.14
SCLT1-205ENST00000503401 WDR36Q8NI36 951 aaKnown RBP15.95■□□□□ 0.14
SCLT1-205ENST00000503401 PDLIM5Q96HC4 596 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms