RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GJA1P17302 382 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DCKP27707 260 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 NRIP1P48552 1158 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 NEK2P51955 445 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 RPS14P62263 151 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PPP1R8Q12972 351 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DCTN2Q13561 401 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 LRRC23Q53EV4 343 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 MPPE1Q53F39 396 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 GPR107Q5VW38 600 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DHRS4L2Q6PKH6 230 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TPRG1Q6ZUI0 275 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TMEM26Q6ZUK4 368 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DET1Q7L5Y6 550 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 VRK3Q8IV63 474 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PLPP6Q8IY26 295 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 MICU2Q8IYU8 434 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CPXM2Q8N436 756 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 FIBINQ8TAL6 211 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 ECHDC3Q96DC8 303 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 VWCEQ96DN2 955 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 ASIC4Q96FT7 647 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 SCRN2Q96FV2 425 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 COG8Q96MW5 612 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 COPS8Q99627 209 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CPPED1Q9BRF8 314 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 SMG9Q9H0W8 520 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KAT8Q9H7Z6 458 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 HPS4Q9NQG7 708 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 HECAQ9UBI9 543 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 SH3BP1Q9Y3L3 701 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KCNE1BA0A087WTH5 132 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KLHL33A6NCF5 533 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 NOBOXO60393 691 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 HPRP00739 348 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KRT6AP02538 564 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KRT6BP04259 564 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CBSLP0DN79 551 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TACR1P25103 407 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CBSP35520 551 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PIGAP37287 484 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 KRT6CP48668 564 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 HSPA14Q0VDF9 509 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PON2Q15165 354 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 HTR3DQ70Z44 454 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 UBE2R2Q712K3 238 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 ANKRD46Q86W74 232 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 CMTM8Q8IZV2 173 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 SELENOMQ8WWX9 145 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 NCLNQ969V3 563 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PYCR2Q96C36 320 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TSSK3Q96PN8 268 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 MBOAT4Q96T53 435 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DOK1Q99704 481 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 INPP5KQ9BT40 448 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 YTHDF1Q9BYJ9 559 aaKnown RBP9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 DNAJB9Q9UBS3 223 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 TMPRSS11EQ9UL52 423 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 PPT2Q9UMR5 302 aa9.62□□□□□ -0.87
CLIP1-204ENST00000501271 FAM220BPB1ANY3 271 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SCELO95171 688 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CPNE6O95741 557 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GSNP06396 782 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 C1SP09871 688 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 IL7RP16871 459 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 HOXB9P17482 250 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 AOAHP28039 575 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 HLA-FP30511 346 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CDKN2CP42773 168 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GZMMP51124 257 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SNRPD1P62314 119 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 PPP2R2BQ00005 443 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 C22orf39Q6P5X5 142 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF773Q6PK81 442 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 USP45Q70EL2 814 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 TMEM179BQ7Z7N9 219 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 GPR149Q86SP6 731 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CALHM3Q86XJ0 350 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 TMC8Q8IU68 726 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SLC22A15Q8IZD6 547 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 OR52E4Q8NGH9 312 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF420Q8TAQ5 688 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 NETO1Q8TDF5 533 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SKA2Q8WVK7 121 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SGCDQ92629 289 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 MRPS31Q92665 395 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 LMLNQ96KR4 655 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SH3GL1Q99961 368 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 OSBPL10Q9BXB5 764 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CFHR5Q9BXR6 569 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 AMBRA1Q9C0C7 1298 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ING2Q9H160 280 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 SUV39H2Q9H5I1 410 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 ZDHHC6Q9H6R6 413 aa9.61□□□□□ -0.87
CLIP1-204ENST00000501271 DCAF13Q9NV06 445 aaKnown RBP9.61□□□□□ -0.87
CLIP1-204ENST00000501271 CD84Q9UIB8 345 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms