RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PHPT1Q9NRX4 125 aaPredicted RBP11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 MIOSQ9NXC5 875 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 KLHL13Q9P2N7 655 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 SETBP1Q9Y6X0 1596 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 SLC25A14O95258 325 aaPredicted RBP11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FGF19O95750 216 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 KHKP50053 298 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 RAB7AP51149 207 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 RDH10Q8IZV5 341 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FRZBQ92765 325 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 ALPK1Q96QP1 1244 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 COPS8Q99627 209 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 TMED9Q9BVK6 235 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 HERC2P3Q9BVR0 1158 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 POPDC2Q9HBU9 364 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 MGAT4CQ9UBM8 478 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 GMDSO60547 372 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 C8BP07358 591 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 ALPPL2P10696 532 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 AVPR1BP47901 424 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 PRKXP51817 358 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 RPA4Q13156 261 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 C14orf28Q4W4Y0 310 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 C7orf57Q8NEG2 295 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FERD3LQ96RJ6 166 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 YTHDF1Q9BYJ9 559 aaKnown RBP11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 CNTNAP2Q9UHC6 1331 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 CEP290O15078 2479 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 NACAE9PAV3 2078 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 SHOXO15266 292 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 GPX6P59796 221 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 PSMA6P60900 246 aaKnown RBP11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FOXO4P98177 505 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 MITD1Q8WV92 249 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FCAMRQ8WWV6 532 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 NR4A3Q92570 626 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 FCRL2Q96LA5 508 aaPredicted RBP11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
AC055713.1-201ENST00000498967 RNF17Q9BXT8 1623 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 UCHL1P09936 223 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 CD72P21854 359 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 CPN2P22792 545 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 NRIP1P48552 1158 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 ZNF132P52740 706 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 DEFA6Q01524 100 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 OR8D1Q8WZ84 308 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 CNOT6Q9ULM6 557 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 DNM1LO00429 736 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 ENTPD3O75355 529 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 IL1BP01584 269 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 NT5EP21589 574 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 THBS3P49746 956 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 CCNHP51946 323 aaPredicted RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 POLR2JP52435 117 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 RALGPS1Q5JS13 557 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 KRBOX4Q5JUW0 171 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 SLC44A5Q8NCS7 719 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 NCSTNQ92542 709 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 CPXM1Q96SM3 734 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 SEMA4AQ9H3S1 761 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 KIF25Q9UIL4 384 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 GNG8Q9UK08 70 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 SPTA1P02549 2419 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 SRPRAP08240 638 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 CMPK1P30085 196 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 MMP14P50281 582 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 OR12D2P58182 307 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 NSUN4Q96CB9 384 aaKnown RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 OR51V1Q9H2C8 321 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 TAS2R8Q9NYW2 309 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 U3KQV3 271 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 A0A0J9YYE9 177 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 SSTR1P30872 391 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 GNRHRP30968 328 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 MXD1Q05195 221 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 ECH1Q13011 328 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 RUNX2Q13950 521 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 TIGD2Q4W5G0 525 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 C3orf49Q96BT1 292 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 YIPF4Q9BSR8 244 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 NPLQ9BXD5 320 aaPredicted RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 OR2B2Q9GZK3 357 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
AC055713.1-201ENST00000498967 ACSL5Q9ULC5 683 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 DPPA5A6NC42 116 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 GPR89AB7ZAQ6 455 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 AGPSO00116 658 aa11□□□□□ -0.65
AC055713.1-201ENST00000498967 GPR89BP0CG08 455 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms