RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SLC2A6Q9UGQ3 507 aa17.9■□□□□ 0.46
PRKCB-209ENST00000498058 VPS4AQ9UN37 437 aa17.9■□□□□ 0.46
PRKCB-209ENST00000498058 ZNF451Q9Y4E5 1061 aa17.9■□□□□ 0.46
PRKCB-209ENST00000498058 PRRC2CQ9Y520 2896 aaKnown RBP17.89■□□□□ 0.46
PRKCB-209ENST00000498058 LIN7AO14910 233 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-209ENST00000498058 OR1I1O60431 355 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 SEMA7AO75326 666 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 CHRM5P08912 532 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-209ENST00000498058 ATXN8OSP0DMR3 200 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 GRIA1P42261 906 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 INPP5JQ15735 1006 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-209ENST00000498058 C1orf189Q5VU69 101 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 EFCAB3Q8N7B9 438 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 OR13J1Q8NGT2 312 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 ELMO1Q92556 727 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 VPS37BQ9H9H4 285 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 TTC7AQ9ULT0 858 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-209ENST00000498058 ASF1AQ9Y294 204 aa17.89■□□□□ 0.45
PRKCB-209ENST00000498058 HIVEP3Q5T1R4 2406 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 PGRMC1O00264 195 aaKnown RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 FGGP02679 453 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 OTX2P32243 289 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 NSG1P42857 185 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 PAFAH1B1P43034 410 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 SEMA3AQ14563 771 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 ITIH4Q14624 930 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 SLC6A19Q695T7 634 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 PACS1Q6VY07 963 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 MED25Q71SY5 747 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 PRUNE1Q86TP1 453 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 SLC13A5Q86YT5 568 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 VRK3Q8IV63 474 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 RASGEF1CQ8N431 466 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 TMEM102Q8N9M5 508 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 LKAAEAR1Q8TD35 194 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 ACTRT1Q8TDG2 376 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 ATG4AQ8WYN0 398 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF778Q96MU6 729 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 GBP5Q96PP8 586 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 SMAD5Q99717 465 aaKnown RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 FRMD8P1Q9BZ68 369 aaPredicted RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 SLC7A5P2Q9GIP4 190 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 DHCR7Q9UBM7 475 aaKnown RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 CDYLQ9Y232 598 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 TDRKHQ9Y2W6 561 aaKnown RBP17.88■□□□□ 0.45
PRKCB-209ENST00000498058 PCDHGB7Q9Y5F8 929 aa17.88■□□□□ 0.45
PRKCB-209ENST00000498058 TCP11X1B4DZS4 312 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF189O75820 626 aaPredicted RBP17.87■□□□□ 0.45
PRKCB-209ENST00000498058 OR2B3O76000 313 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 GSTM1P09488 218 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 SHMT2P34897 504 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 CSE1LP55060 971 aaKnown RBP17.87■□□□□ 0.45
PRKCB-209ENST00000498058 GSTM4Q03013 218 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 MRPL49Q13405 166 aaKnown RBP17.87■□□□□ 0.45
PRKCB-209ENST00000498058 SLC9A5Q14940 896 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 MLIPQ5VWP3 458 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 RHBDD2Q6NTF9 364 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF534Q76KX8 674 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 MRGPREQ86SM8 312 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 TBC1D21Q8IYX1 336 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 DNAJC22Q8N4W6 341 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 OR5K2Q8NHB8 316 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 C19orf60Q96EN9 201 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 TCTN2Q96GX1 697 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 MENTQ9BUN1 341 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 LRRC4CQ9HCJ2 640 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 SLC22A11Q9NSA0 550 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 HOMER3Q9NSC5 361 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 KLHL20Q9Y2M5 609 aa17.87■□□□□ 0.45
PRKCB-209ENST00000498058 A0A0J9YY10 115 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 GOLGA6L10A0A0M3HER8 536 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 DPM1O60762 260 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 URI1O94763 535 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-209ENST00000498058 GOT2P00505 430 aaKnown RBP17.86■□□□□ 0.45
PRKCB-209ENST00000498058 AGXTP21549 392 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 CCR7P32248 378 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 GCGRP47871 477 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 P3H1Q32P28 736 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 FHL5Q5TD97 284 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF449Q6P9G9 518 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 GPR135Q8IZ08 494 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 ZNF655Q8N720 491 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-209ENST00000498058 COG1Q8WTW3 980 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 HDAC10Q969S8 669 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 DPH2Q9BQC3 489 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-209ENST00000498058 CHRNA10Q9GZZ6 450 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 ETNK1Q9HBU6 452 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 GPR83Q9NYM4 423 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 CIDEBQ9UHD4 219 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 MDC1Q14676 2089 aaKnown RBP17.86■□□□□ 0.45
PRKCB-209ENST00000498058 DOCK10Q96BY6 2186 aa17.86■□□□□ 0.45
PRKCB-209ENST00000498058 C9J4A7 227 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 FANCGO15287 622 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 MAP3K7O43318 606 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 AGFG2O95081 481 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 FTH1P02794 183 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 UMODP07911 640 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 HBQ1P09105 142 aa17.85■□□□□ 0.45
PRKCB-209ENST00000498058 ETS1P14921 441 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms