RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 AP1M1Q9BXS5 423 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 VN1R1Q9GZP7 353 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 ANKZF1Q9H8Y5 726 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 PELI2Q9HAT8 420 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 SLC52A3Q9NQ40 469 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 PPANQ9NQ55 473 aaKnown RBP3.01□□□□□ -1.93
PSPC1-205ENST00000497722 CLIC5Q9NZA1 410 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 CRNNQ9UBG3 495 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-205ENST00000497722 WBP11Q9Y2W2 641 aaKnown RBP3.01□□□□□ -1.93
PSPC1-205ENST00000497722 RIPK3Q9Y572 518 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 NME7Q9Y5B8 376 aa3.01□□□□□ -1.93
PSPC1-205ENST00000497722 HHLA1C9JL84 531 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 PLOD3O60568 738 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 TRMUO75648 421 aaKnown RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 EDN1P05305 212 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 FYNP06241 537 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 LIFP15018 202 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 NR1D1P20393 614 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 CDH3P22223 829 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 SP100P23497 879 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 HSPA4P34932 840 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 MAPK12P53778 367 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 LGALS3BPQ08380 585 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 PTPRCAPQ14761 206 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 FCN2Q15485 313 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ODF4Q2M2E3 257 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF876PQ49A33 203 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ZC2HC1CQ53FD0 456 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 TCP11X2Q5H9J9 407 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 GRTP1Q5TC63 336 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 CHST3Q7LGC8 479 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 KRT74Q7RTS7 529 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 TMEM139Q8IV31 216 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF595Q8IYB9 648 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 RYBPQ8N488 228 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF611Q8N823 705 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 NIPA2Q8N8Q9 360 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 TRIML1Q8N9V2 468 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 KLHDC9Q8NEP7 349 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 OR13J1Q8NGT2 312 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 IRGQQ8WZA9 623 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 MOB3AQ96BX8 217 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 SLC47A1Q96FL8 570 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 PGAP3Q96FM1 320 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF558Q96NG5 402 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 BTBD10Q9BSF8 475 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 FAM49AQ9H0Q0 323 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 CCDC177Q9NQR7 707 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 SERINC1Q9NRX5 453 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 OLAHQ9NV23 265 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 SPHK1Q9NYA1 384 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 TBC1D7Q9P0N9 293 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF624Q9P2J8 865 aaPredicted RBP3□□□□□ -1.93
PSPC1-205ENST00000497722 B3GAT1Q9P2W7 334 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ZDHHC2Q9UIJ5 367 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 ANAPC5Q9UJX4 755 aa3□□□□□ -1.93
PSPC1-205ENST00000497722 A0A1W2PN81 502 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 ZNF197O14709 1029 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 CENPBP07199 599 aaPredicted RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 RAB40ALP0C0E4 278 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 CCDC175P0C221 793 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 SMIM18P0DKX4 95 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 HSPA8P11142 646 aaKnown RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 IL11P20809 199 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 ITGA3P26006 1051 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 CHRNA7P36544 502 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 DCTP40126 519 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 CCR10P46092 362 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 SNRPD1P62314 119 aaKnown RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 TUBB4BP68371 445 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 PNRC1Q12796 327 aaPredicted RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 PSMD6Q15008 389 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 KIAA1644Q3SXP7 199 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 PHLDA2Q53GA4 152 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 TCTE1Q5JU00 501 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 C1orf141Q5JVX7 400 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 FFAR4Q5NUL3 377 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 C15orf39Q6ZRI6 1047 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 MFSD6Q6ZSS7 791 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 PLPPR4Q7Z2D5 763 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 ADCK2Q7Z695 626 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 EID3Q8N140 333 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 OR13C3Q8NGS6 347 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 FCAMRQ8WWV6 532 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 HSD17B8Q92506 261 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 ERP27Q96DN0 273 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 GBP5Q96PP8 586 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 BAG1Q99933 345 aaPredicted RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 GTPBP2Q9BX10 602 aaKnown RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 A4GALTQ9NPC4 353 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 SCRT2Q9NQ03 307 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 DDX43Q9NXZ2 648 aaKnown RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 FLRT3Q9NZU0 649 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 NFKBIL1Q9UBC1 381 aaPredicted RBP2.99□□□□□ -1.93
PSPC1-205ENST00000497722 DAPK2Q9UIK4 370 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 TUBE1Q9UJT0 475 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 ACAD8Q9UKU7 415 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 RNF150Q9ULK6 438 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 TMED3Q9Y3Q3 217 aa2.99□□□□□ -1.93
PSPC1-205ENST00000497722 RPS6KL1Q9Y6S9 549 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms