RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ABR	Q12979	859 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	KCNAB2	Q13303	367 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	KLF1	Q13351	362 aa	Predicted RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRIM14	Q14142	442 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	PDK1	Q15118	436 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC1A5	Q15758	541 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	RPE65	Q16518	533 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	KCTD19	Q17RG1	926 aa	Predicted RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	SKIDA1	Q1XH10	827 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	PRAMEF17	Q5VTA0	474 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	FAM69B	Q5VUD6	431 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	CPZ	Q66K79	652 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	KCTD11	Q693B1	232 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	WASH2P	Q6VEQ5	465 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZC3H18	Q86VM9	953 aa	Known RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	PTRH1	Q86Y79	214 aa	Known RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	CILP2	Q8IUL8	1156 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	NLGN4X	Q8N0W4	816 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC25A41	Q8N5S1	370 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC38A9	Q8NBW4	561 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	ACRBP	Q8NEB7	543 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	IPMK	Q8NFU5	416 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR13C4	Q8NGS5	318 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR10G6	Q8NH81	332 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	FLVCR1-AS1	Q8TAF5	88 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	DTX3L	Q8TDB6	740 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	CT55	Q8WUE5	264 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	STARD8	Q92502	1023 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	NCSTN	Q92542	709 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	SLC41A2	Q96JW4	573 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	TGM7	Q96PF1	710 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	JMJD8	Q96S16	334 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	DPYSL5	Q9BPU6	564 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	APOL2	Q9BQE5	337 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	FICD	Q9BVA6	458 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRIM55	Q9BYV6	548 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	OSGEPL1	Q9H4B0	414 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	WASH6P	Q9NQA3	447 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	POT1	Q9NUX5	634 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRIM10	Q9UDY6	481 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	CROT	Q9UKG9	612 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	INTU	Q9ULD6	942 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	R3HDM2	Q9Y2K5	976 aa	Known RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	ALG6	Q9Y672	507 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	ARL5A	Q9Y689	179 aa		5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	CFAP20	Q9Y6A4	193 aa	Known RBP	5.37	□□□□□ -1.55
UBE3C-208	ENST00000497368	ANKRD12	Q6UB98	2062 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	FBN2	P35556	2912 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CRYBG3	Q68DQ2	2970 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	IGLV3-16	A0A075B6K0	115 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TRBV5-4	A0A0C4DH59	114 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR14I1	A6ND48	311 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	OR2AG2	A6NM03	316 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ZNF891	A8MT65	544 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GPR89A	B7ZAQ6	455 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GOLGA6L19	H0YKK7	550 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	APOC4-APOC2	K7ER74	178 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	KMO	O15229	486 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	LDB2	O43679	373 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	VEGFD	O43915	354 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	AKR1B10	O60218	316 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	DNAJB5	O75953	348 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	KIAA0754	O94854	1291 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	METTL18	O95568	372 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	APOC2	P02655	101 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CD3E	P07766	207 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GPR89B	P0CG08	455 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	MTHFD1	P11586	935 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TNNT1	P13805	278 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	IFNGR1	P15260	489 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	NELFE	P18615	380 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ATF4	P18848	351 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ENDOU	P21128	410 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CA4	P22748	312 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PSMA3	P25788	255 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	NFKBIA	P25963	317 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CTNNA2	P26232	953 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PEBP1	P30086	187 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CSTF2	P33240	577 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	SPAM1	P38567	509 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GABRA4	P48169	554 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ARCN1	P48444	511 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	SEPHS1	P49903	392 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	KPNA2	P52292	529 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	FOXL2	P58012	376 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	OTUD4	Q01804	1114 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TLE1	Q04724	770 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	ABHD18	Q0P651	414 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TMEM115	Q12893	351 aa	Predicted RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GPS2	Q13227	327 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	INSC	Q1MX18	579 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	BCL7A	Q4VC05	210 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	TFDP3	Q5H9I0	405 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	DCAF12	Q5T6F0	453 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	KAZN	Q674X7	775 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	PWWP2B	Q6NUJ5	590 aa		5.36	□□□□□ -1.55
UBE3C-208	ENST00000497368	GALNT18	Q6P9A2	607 aa		5.36	□□□□□ -1.55

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