RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ACTR1BP42025 376 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CDKN2CP42773 168 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 OR3A3P47888 321 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CCR4P51679 360 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PLK1P53350 603 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MAPK12P53778 367 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 OAZ1P54368 228 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 EPHB4P54760 987 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MERTKQ12866 999 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ILF3Q12906 894 aaKnown RBP eCLIP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BAMBIQ13145 260 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TARDBPQ13148 414 aaKnown RBP eCLIP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MADCAM1Q13477 382 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TUBB2AQ13885 445 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KARSQ15046 597 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TRIP13Q15645 432 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TBCCQ15814 346 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM189A2Q15884 450 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 UAP1Q16222 522 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC5A12Q1EHB4 618 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TRIM16LQ309B1 348 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TWISTNBQ3B726 338 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 HSDL1Q3SXM5 330 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 NKAIN1Q4KMZ8 207 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KLHL12Q53G59 568 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PLA1AQ53H76 456 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TCP11X2Q5H9J9 407 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ATG16L1Q676U5 607 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 IGFL4Q6B9Z1 124 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TCEAL6Q6IPX3 200 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FBXO46Q6PJ61 603 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DHRS4L2Q6PKH6 230 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 USP17L6PQ6QN14 398 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SCARA5Q6ZMJ2 495 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FRA10AC1Q70Z53 315 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 IQCHQ86VS3 1027 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ARMC8Q8IUR7 673 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 NUDCD3Q8IVD9 361 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ARHGEF19Q8IW93 802 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ENTHD1Q8IYW4 607 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ADGRF2Q8IZF7 708 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 THEM5Q8N1Q8 247 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RIBC1Q8N443 379 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MB21D1Q8N884 522 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF152Q8N8N0 203 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CATSPER1Q8NEC5 780 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BPIFCQ8NFQ6 507 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CSGALNACT1Q8TDX6 532 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CHPT1Q8WUD6 406 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CD101Q93033 1021 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DUS3LQ96G46 650 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 LCORQ96JN0 433 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 C5orf34Q96MH7 638 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KLHL5Q96PQ7 755 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SSX3Q99909 188 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 COPS4Q9BT78 406 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MYL10Q9BUA6 226 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DUSP26Q9BV47 211 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TUBB2BQ9BVA1 445 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BOCQ9BWV1 1114 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC19A3Q9BZV2 496 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 METTL9Q9H1A3 318 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MEGF9Q9H1U4 602 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PABPC3Q9H361 631 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MTG2Q9H4K7 406 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TAF1DQ9H5J8 278 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MLXIPQ9HAP2 919 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FOLH1BQ9HBA9 442 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RAVER2Q9HCJ3 691 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PANK4Q9NVE7 773 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DNAJC17Q9NVM6 304 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SMARCAL1Q9NZC9 954 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 GRHL1Q9NZI5 618 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KCND3Q9UK17 655 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 APPL1Q9UKG1 709 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CHKBQ9Y259 395 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MAN2B2Q9Y2E5 1009 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DHRS7Q9Y394 339 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RIPK3Q9Y572 518 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RAB3GAP2Q9H2M9 1393 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CAMSAP2Q08AD1 1489 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MAP3K15Q6ZN16 1313 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SETD5Q9C0A6 1442 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PRDM15P57071 1507 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PQLC2LA1A4F0 135 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 USP27XA6NNY8 438 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 F8VP50 259 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TGM5O43548 720 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 FOXS1O43638 330 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF1BO60739 113 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 NDUFS2O75306 463 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DCTN3O75935 186 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DDNO94850 711 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNK5O95279 499 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TNNC2P02585 160 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 LPLP06858 475 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ANXA5P08758 320 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SUPT20HL2P0C7V6 817 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MSH3P20585 1137 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DDCP20711 480 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms