RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	UBXN8	O00124	270 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KLK8	O60259	260 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	VIP	P01282	170 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	DHRS4L1	P0CG22	281 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ALPPL2	P10696	532 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HIST1H2AD	P20671	130 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HHEX	Q03014	270 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PRKG2	Q13237	762 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TTC23L	Q6PF05	361 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MBOAT1	Q6ZNC8	495 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TRIM48	Q8IWZ4	208 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC35F3	Q8IY50	421 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ARL10	Q8N8L6	244 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	AVL9	Q8NBF6	648 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PDPR	Q8NCN5	879 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	OR9A1P	Q8NGU1	263 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RDH11	Q8TC12	318 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZFPM2	Q8WW38	1151 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	EXT2	Q93063	718 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HIST1H2AH	Q96KK5	128 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PKP4	Q99569	1192 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HIST1H2AJ	Q99878	128 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	H2AFJ	Q9BTM1	129 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KIR3DX1	Q9H7L2	352 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ARL15	Q9NXU5	204 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NUDT4	Q9NZJ9	180 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SUPT3H	B4E1H0	165 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PPM1D	O15297	605 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SIGLEC6	O43699	453 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SUPT3H	O75486	399 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GUCA1C	O95843	209 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MDH1	P40925	334 aa	Known RBP	13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC14A1	Q13336	389 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GPR18	Q14330	331 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KRT33B	Q14525	404 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PCLAF	Q15004	111 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SUZ12	Q15022	739 aa	Known RBP	13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CDKL4	Q5MAI5	379 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZYG11A	Q6WRX3	759 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RBM12B	Q8IXT5	1001 aa	Known RBP	13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	EID2	Q8N6I1	236 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FAM181A	Q8N9Y4	354 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	OR52E1	Q8NGJ3	308 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CCDC138	Q96M89	665 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CAPS2	Q9BXY5	557 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TMEM9B	Q9NQ34	198 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CD274	Q9NZQ7	290 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	COPG2	Q9UBF2	871 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CIDEB	Q9UHD4	219 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TDRKH	Q9Y2W6	561 aa	Known RBP	13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LY6G6E	A0A0G2JKS1	128 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NCF1B	A6NI72	391 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852		A8MT66	165 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NCF1C	A8MVU1	366 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FOXD2	O60548	495 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC16A8	O95907	504 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ANXA5	P08758	320 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ERG	P11308	486 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NCF1	P14598	390 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CPA3	P15088	417 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	IMPA1	P29218	277 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	WDR4	P57081	412 aa	Known RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GNGT1	P63211	74 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ASCL5	Q7RTU5	278 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PPP1R14C	Q8TAE6	165 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RHBDF1	Q96CC6	855 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FBXL8	Q96CD0	374 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	APOLD1	Q96LR9	279 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NRTN	Q99748	197 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	STN1	Q9H668	368 aa	Known RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SPATA7	Q9P0W8	599 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	STOX2	Q9P2F5	926 aa	Predicted RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MID2	Q9UJV3	735 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ADAM21	Q9UKJ8	722 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TMCO1	Q9UM00	188 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PLAGL1	Q9UM63	463 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	BTBD3	Q9Y2F9	522 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852		U3KQA8	63 aa		13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MDC1	Q14676	2089 aa	Known RBP	13.55	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PABPN1L	A6NDY0	278 aa	Known RBP	13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TAPBP	O15533	448 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FLRT2	O43155	660 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	DLX3	O60479	287 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SMIM24	O75264	130 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MYL2	P10916	166 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CD59	P13987	128 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TAC1	P20366	129 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ATP5F1	P24539	256 aa	Predicted RBP	13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NFKB2	Q00653	900 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	AASDH	Q4L235	1098 aa	Predicted RBP	13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SULT1C3	Q6IMI6	304 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TMEM26	Q6ZUK4	368 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FBXO39	Q8N4B4	442 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZNF480	Q8WV37	535 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	IL17F	Q96PD4	163 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	EGFL8	Q99944	293 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MECR	Q9BV79	373 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	UCK1	Q9HA47	277 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms