RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 MAGEB10Q96LZ2 347 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 RIOK2Q9BVS4 552 aaKnown RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 PIF1Q9H611 641 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 DNAJC11Q9NVH1 559 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 DKK3Q9UBP4 350 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ZNHIT2Q9UHR6 403 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 RWDD3Q9Y3V2 267 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 TCF20Q9UGU0 1960 aaKnown RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 SMIM31A0A1B0GVY4 71 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 ARHGAP10A1A4S6 786 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF197O14709 1029 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 CLPTM1O96005 669 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 CYP17A1P05093 508 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PGRP06401 933 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 GSTM1P09488 218 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 BCKDHAP12694 445 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PRPH2P23942 346 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 WEE1P30291 646 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 IRS1P35568 1242 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DGKGP49619 791 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 GSTM4Q03013 218 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 APOFQ13790 326 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DHCR24Q15392 516 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 SPANXN4Q5MJ08 99 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 TMEM240Q5SV17 173 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 TMTC4Q5T4D3 741 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 GLYATQ6IB77 296 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PSRC1Q6PGN9 363 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 IYDQ6PHW0 289 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 AADATQ8N5Z0 425 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 L3MBTL4Q8NA19 623 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 MTFMTQ96DP5 389 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 VPS35Q96QK1 796 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 P2RY13Q9BPV8 354 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 ANKRD60Q9BZ19 345 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DUS2Q9NX74 493 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 FBXO10Q9UK96 956 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PADI4Q9UM07 663 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DENND4AQ7Z401 1863 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 OR2AG2A6NM03 316 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 C16orf96A6NNT2 1141 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 AHCYL1O43865 530 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DFNA5O60443 496 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 FESP07332 822 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 ADH5P11766 374 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 CDH1P12830 882 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 SYN1P17600 705 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 GGT1P19440 569 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 MAPK1P28482 360 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 MMP12P39900 470 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 RPS14P62263 151 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PLIN5Q00G26 463 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 CYP4F3Q08477 520 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PLA2G4EQ3MJ16 856 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 SYTL3Q4VX76 610 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF697Q5TEC3 545 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 SPRED1Q7Z699 444 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 SATL1Q86VE3 508 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 RASGRP3Q8IV61 690 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 RAVER1Q8IY67 606 aaKnown RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 FAM9CQ8IZT9 166 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 DTWD1Q8N5C7 304 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 KRTCAP2Q8N6L1 136 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PYCR2Q96C36 320 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 FBXL8Q96CD0 374 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 CCDC115Q96NT0 180 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
GARNL3-220ENST00000496711 MYO7AQ13402 2215 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ATG2AQ2TAZ0 1938 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 C2orf16Q68DN1 1984 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 LINC01553A4QN01 128 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 TULP3O75386 442 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 SLCO2B1O94956 709 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 RASAL1O95294 804 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ANXA6P08133 673 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ELFN1P0C7U0 828 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 C7P10643 843 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 PRPS2P11908 318 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 ITPKAP23677 461 aa12.71□□□□□ -0.37
GARNL3-220ENST00000496711 POLE2P56282 527 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms