RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 RIMKLBQ9ULI2 386 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 SNX7Q9UNH6 387 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 ZNF148Q9UQR1 794 aa11.24□□□□□ -0.61
VTI1A-208ENST00000494728 RUVBL2Q9Y230 463 aaKnown RBP11.24□□□□□ -0.61
VTI1A-208ENST00000494728 A0A0J9YY10 115 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 E7EQ34 232 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 E7EVH7 732 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 NRP2O60462 931 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 KLF7O75840 302 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 F7P08709 466 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 GSTM1P09488 218 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 RAB40ALP0C0E4 278 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 ITGAXP20702 1163 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 MAGP20916 626 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 ADRA1DP25100 572 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 PKLRP30613 574 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 STIP1P31948 543 aaKnown RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 GCGRP47871 477 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 CCL11P51671 97 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 GSTM4Q03013 218 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 SLC9A5Q14940 896 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 CCSMST1Q4G0I0 132 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 C2orf73Q8N5S3 287 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 OR6P1Q8NGX9 317 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 THAP4Q8WY91 577 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 GBP5Q96PP8 586 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 ALS2CR12Q96Q35 445 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 SYTL2Q9HCH5 934 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 CHRAC1Q9NRG0 131 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 TREX1Q9NSU2 369 aa11.23□□□□□ -0.61
VTI1A-208ENST00000494728 DHCR7Q9UBM7 475 aaKnown RBP11.23□□□□□ -0.61
VTI1A-208ENST00000494728 QSOX1O00391 747 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 GPC4O75487 556 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 CEACAM4O75871 244 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 OR2B3O76000 313 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SORBS2O94875 1100 aaKnown RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 TMEM63AO94886 807 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SVILO95425 2214 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 KLK3P07288 261 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 NMBRP28336 390 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 BDKRB1P46663 353 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 KCNJ1P48048 391 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 CD97P48960 835 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SESN2P58004 480 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 HSPA14Q0VDF9 509 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 RAPSNQ13702 412 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 CTSL3PQ5NE16 218 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 MRGPREQ86SM8 312 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 DNAJC22Q8N4W6 341 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 DTWD1Q8N5C7 304 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 CCDC89Q8N998 374 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 TEX19Q8NA77 164 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 Q8NA96 180 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 PPHLN1Q8NEY8 458 aaKnown RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 FDCSPQ8NFU4 85 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SGSM3Q96HU1 749 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SLC25A23Q9BV35 468 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 FRMD8P1Q9BZ68 369 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 TSGA10Q9BZW7 698 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 P2RY12Q9H244 342 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 LZTFL1Q9NQ48 299 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SLC22A11Q9NSA0 550 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 CATSPERZQ9NTU4 200 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 SYBUQ9NX95 663 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 OR6C2Q9NZP2 312 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 LUZP4Q9P127 313 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 PAK5Q9P286 719 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 PCDHGA9Q9Y5G4 932 aaKnown RBP11.22□□□□□ -0.61
VTI1A-208ENST00000494728 NFS1Q9Y697 457 aa11.22□□□□□ -0.61
VTI1A-208ENST00000494728 ISM1B1AKI9 464 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 GOLGA8KD6RF30 607 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 GOLGA8TH3BQL2 631 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 ZSCAN9O15535 394 aaPredicted RBP11.21□□□□□ -0.61
VTI1A-208ENST00000494728 KRT86O43790 486 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 AOAHP28039 575 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 PSMB5P28074 263 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 RAB28P51157 221 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 PGDP52209 483 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 TERF1P54274 439 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 PRAMEP78395 509 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 RPS6KA1Q15418 735 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 KYNUQ16719 465 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 SLC5A12Q1EHB4 618 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
VTI1A-208ENST00000494728 RHBDD2Q6NTF9 364 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 ZNF449Q6P9G9 518 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 CES3Q6UWW8 571 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
VTI1A-208ENST00000494728 CFAP61Q8NHU2 1237 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 SEC14L1Q92503 715 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.61
VTI1A-208ENST00000494728 TCTN2Q96GX1 697 aa11.21□□□□□ -0.61
VTI1A-208ENST00000494728 CHRNA10Q9GZZ6 450 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms