RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TRIM25Q14258 630 aaKnown RBP10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 TAF11Q15544 211 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 AAK1Q2M2I8 961 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 SAMD4BQ5PRF9 694 aaKnown RBP10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 IL23RQ5VWK5 629 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 C11orf96Q7Z7L8 435 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC15A3Q8IY34 581 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 RGL4Q8IZJ4 473 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 NUDT8Q8WV74 236 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 DNAJC9Q8WXX5 260 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 TMEM159Q96B96 161 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 LRRC58Q96CX6 371 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 COX14Q96I36 57 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 LINC00615Q96LM1 132 aaPredicted RBP10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 ACPTQ9BZG2 426 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 ATG10Q9H0Y0 220 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 ACTR8Q9H981 624 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 DYRK4Q9NR20 520 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 DNAJC11Q9NVH1 559 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 STOX2Q9P2F5 926 aaPredicted RBP10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 ATXN10Q9UBB4 475 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 ZNF490Q9ULM2 529 aaPredicted RBP10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC22A14Q9Y267 594 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 NEUROG3Q9Y4Z2 214 aa10.35□□□□□ -0.75
PRPF4B-209ENST00000494674 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 K7EQS6 105 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 CASQ2O14958 399 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 MID1O15344 667 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 RGS14O43566 566 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 AP1G1O43747 822 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 BAG2O95816 211 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PDYNP01213 254 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 C8BP07358 591 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 ZNF8P17098 575 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 TCN1P20061 433 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 CD22P20273 847 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 ATP6V1C1P21283 382 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PBLDP30039 288 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 LTBRP36941 435 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 WASP42768 502 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 KIR2DL1P43626 348 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 KCNK10P57789 538 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 MRPS22P82650 360 aaKnown RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 CST6Q15828 149 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 CPSF6Q16630 551 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 TIGD2Q4W5G0 525 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PRMT9Q6P2P2 845 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 ADAMTSL4Q6UY14 1074 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 KIAA2013Q8IYS2 634 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 DPP10Q8N608 796 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 OR4K3Q96R72 315 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 HOPXQ9BPY8 73 aaPredicted RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 TRMT61BQ9BVS5 477 aaKnown RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 ZCCHC2Q9C0B9 1178 aaKnown RBP10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 IL1RL2Q9HB29 575 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 TRIM39Q9HCM9 518 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 SERGEFQ9UGK8 458 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PSMD13Q9UNM6 376 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PCDHA9Q9Y5H5 950 aa10.34□□□□□ -0.75
PRPF4B-209ENST00000494674 PRSS51A0A1B0GVH4 220 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 SERTM1A2A2V5 107 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 GRXCR2A6NFK2 248 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 LIN7AO14910 233 aaPredicted RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 KRT6AP02538 564 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 CATP04040 527 aaKnown RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 KRT6BP04259 564 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 HSD17B1P14061 328 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 SLC2A4P14672 509 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 ACADSP16219 412 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 PRPH2P23942 346 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 IMPA1P29218 277 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 GNPDA1P46926 289 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 KRT6CP48668 564 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 GALK1P51570 392 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 ATXN3P54252 364 aaPredicted RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 PCDH1Q08174 1060 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 TRAP1Q12931 704 aaKnown RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 PRKG2Q13237 762 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 HTR4Q13639 388 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 PTGR1Q14914 329 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 MUM1Q2TAK8 710 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 SGO1Q5FBB7 561 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 FAM46CQ5VWP2 391 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 CES5AQ6NT32 575 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 AGTRAPQ6RW13 159 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 SUSD1Q6UWL2 747 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 CACUL1Q86Y37 369 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 TRAPPC5Q8IUR0 188 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 FBXO15Q8NCQ5 510 aaPredicted RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 OR56A3Q8NH54 315 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 CXorf40AQ8TE69 158 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 TMEM125Q96AQ2 219 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 NAF1Q96HR8 494 aaKnown RBP10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 PKP4Q99569 1192 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
PRPF4B-209ENST00000494674 MRPL40Q9NQ50 206 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms