RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ADGRD2Q7Z7M1 963 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 GPALPP1Q8IXQ4 340 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 TCTE3Q8IZS6 198 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 C12orf45Q8N5I9 185 aaPredicted RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 GDPD1Q8N9F7 314 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 TTC29Q8NA56 475 aaPredicted RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 TXNDC5Q8NBS9 432 aaKnown RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 OR9I1Q8NGQ6 314 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 COQ8AQ8NI60 647 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 PHOSPHO1Q8TCT1 267 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 BPIFB1Q8TDL5 484 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 CLEC4DQ8WXI8 215 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 ASB15Q8WXK1 588 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 PYCR2Q96C36 320 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 CERS2Q96G23 380 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 HYLS1Q96M11 299 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 ZSWIM3Q96MP5 696 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 BBS4Q96RK4 519 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 EIF2AK1Q9BQI3 630 aaKnown RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 SYT11Q9BT88 431 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 PDCD10Q9BUL8 212 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 PTDSS2Q9BVG9 487 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 C11orf54Q9H0W9 315 aaPredicted RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 EXOSC4Q9NPD3 245 aaKnown RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 TOPORSQ9NS56 1045 aaPredicted RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 ABCB8Q9NUT2 735 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 HSPBP1Q9NZL4 362 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 HCN3Q9P1Z3 774 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 MBD1Q9UIS9 605 aaPredicted RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 ANAPC2Q9UJX6 822 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 INTS6Q9UL03 887 aaKnown RBP3.97□□□□□ -1.77
ATG3-207ENST00000494571 MKLN1Q9UL63 735 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 KCNH4Q9UQ05 1017 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 LYVE1Q9Y5Y7 322 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 KCNMB2Q9Y691 235 aa3.97□□□□□ -1.77
ATG3-207ENST00000494571 FAM208AQ9UK61 1670 aaKnown RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 FRMPD2Q68DX3 1309 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 RPS10-NUDT3A0A1W2PQS6 291 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 KLRG2A4D1S0 409 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 ERVV-1B6SEH8 477 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 E9PI62 339 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 H0YAE9 185 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 DNASE2O00115 360 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 GNGT2O14610 69 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 PDCD5O14737 125 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SCAMP1O15126 338 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SLC22A2O15244 555 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SLC37A4O43826 429 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 LZTS3O60299 673 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 FZD6O60353 706 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 PLIN3O60664 434 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 H2AFYO75367 372 aaKnown RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 TADA2AO75478 443 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 CDC123O75794 336 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 PDE9AO76083 593 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SNX4O95219 450 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 ANGPTL1O95841 491 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 NDUFB10O96000 172 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 GSRP00390 522 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 AHSGP02765 367 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 PRKCGP05129 697 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 CNPP09543 421 aaKnown RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 TRAPPC2P0DI81 140 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 TRAPPC2BP0DI82 140 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SPP1P10451 314 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 C6P13671 934 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 HNRNPLP14866 589 aaKnown RBP eCLIP3.96□□□□□ -1.78
ATG3-207ENST00000494571 TCF3P15923 654 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 VAMP1P23763 118 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 YWHABP31946 246 aaKnown RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 ATP6V1E1P36543 226 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 RAP1GAPP47736 663 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 OR1G1P47890 313 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 LIMK1P53667 647 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 C1QTNF8P60827 252 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 GABREP78334 506 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 CUL2Q13617 745 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 KCNC3Q14003 757 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 PON3Q15166 354 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 GPR19Q15760 415 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 ALG11Q2TAA5 492 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 AP5B1Q2VPB7 878 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 ACER2Q5QJU3 275 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 GPR139Q6DWJ6 353 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 RAET1GQ6H3X3 334 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 KIAA1211LQ6NV74 962 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 C3orf33Q6P1S2 294 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 USP45Q70EL2 814 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 HTR3DQ70Z44 454 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 DNAJB7Q7Z6W7 309 aaPredicted RBP3.96□□□□□ -1.78
ATG3-207ENST00000494571 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 GALNT5Q7Z7M9 940 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 SYVN1Q86TM6 617 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 RHOT1Q8IXI2 618 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 PGBD3Q8N328 593 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 VWA5B2Q8N398 1253 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 EMC1Q8N766 993 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 WDSUB1Q8N9V3 476 aa3.96□□□□□ -1.78
ATG3-207ENST00000494571 ZNF540Q8NDQ6 660 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms