RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 DCAF10Q5QP82 559 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 VWA5B1Q5TIE3 1220 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 KCTD11Q693B1 232 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 IQCKQ8N0W5 287 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 GALNT16Q8N428 558 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 CLEC1AQ8NC01 280 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 FLVCR1-AS1Q8TAF5 88 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 INPP5DQ92835 1189 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 LRRC45Q96CN5 670 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 TCTN2Q96GX1 697 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 DPH2Q9BQC3 489 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 ZBTB20Q9HC78 741 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 TXLNGQ9NUQ3 528 aa12.19□□□□□ -0.46
SKA1-205ENST00000494518 FEZ2Q9UHY8 353 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 ERRFI1Q9UJM3 462 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 PACSIN2Q9UNF0 486 aaPredicted RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 R3HDM2Q9Y2K5 976 aaKnown RBP12.19□□□□□ -0.46
SKA1-205ENST00000494518 CCDC162PA2VCL2 907 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 GRID2IPA4D2P6 1211 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 H7C0S8 307 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 PEX12O00623 359 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 LIN7AO14910 233 aaPredicted RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 OR1I1O60431 355 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 TJP3O95049 919 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 ACADLP28330 430 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 DCDP81605 110 aaKnown RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 SSPNQ14714 243 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 MYBPC3Q14896 1274 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 PARP6Q2NL67 630 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 NKAIN1Q4KMZ8 207 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 RHBDD2Q6NTF9 364 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 PPP1R32Q7Z5V6 425 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 METTL27Q8N6F8 245 aaPredicted RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 ACRBPQ8NEB7 543 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 STYXQ8WUJ0 223 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.18□□□□□ -0.46
SKA1-205ENST00000494518 FER1L6-AS2Q96M78 137 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 DHRS4Q9BTZ2 278 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 ILKAPQ9H0C8 392 aaPredicted RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 LRRC40Q9H9A6 602 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 LUC7LQ9NQ29 371 aaKnown RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 P4HTMQ9NXG6 502 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 B3GNT3Q9Y2A9 372 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 EFR3BQ9Y2G0 817 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 REXO2Q9Y3B8 237 aaKnown RBP12.18□□□□□ -0.46
SKA1-205ENST00000494518 CSAG2Q9Y5P2 127 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
SKA1-205ENST00000494518 ABCA12Q86UK0 2595 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 TCRBV7S2A1N4TA0A589 114 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
SKA1-205ENST00000494518 AP2A2O94973 939 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 CLDN1O95832 211 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 FTH1P02794 183 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 UMODP07911 640 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 MAGP20916 626 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 PTMSP20962 102 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 ALAS2P22557 587 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 FOXN2P32314 431 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 CETN2P41208 172 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 NSG1P42857 185 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 CYP2A13Q16696 494 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 LYPLAL1Q5VWZ2 237 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 SHISA6Q6ZSJ9 500 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 HPS6Q86YV9 775 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 KLHDC8BQ8IXV7 354 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 OR52K1Q8NGK4 314 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 OR2Y1Q8NGV0 311 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 OR5K2Q8NHB8 316 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 CFAP61Q8NHU2 1237 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 LKAAEAR1Q8TD35 194 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.17□□□□□ -0.46
SKA1-205ENST00000494518 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 PPP1R2P1Q96PQ5 205 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 RANBP9Q96S59 729 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 C17orf62Q9BQA9 187 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 TMEM121Q9BTD3 319 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 LACRTQ9GZZ8 138 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 ZNF552Q9H707 407 aaPredicted RBP12.17□□□□□ -0.46
SKA1-205ENST00000494518 SLC22A11Q9NSA0 550 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 SLC2A6Q9UGQ3 507 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 NTNG1Q9Y2I2 539 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 EPN1Q9Y6I3 576 aaPredicted RBP12.17□□□□□ -0.46
SKA1-205ENST00000494518 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 MYO7BQ6PIF6 2116 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
SKA1-205ENST00000494518 SLC5A10A0PJK1 596 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 CBX6O95503 412 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 AP2A1O95782 977 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 DDAH2O95865 285 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 ALPPP05187 535 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 MCM3P25205 808 aa12.16□□□□□ -0.46
SKA1-205ENST00000494518 ITGA3P26006 1051 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms