RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 HACD2Q6Y1H2 254 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 MBOAT1Q6ZNC8 495 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 RINLQ6ZS11 566 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 FRA10AC1Q70Z53 315 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 MILR1Q7Z6M3 343 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TRIM74Q86UV6 250 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 LRRTM4Q86VH4 590 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 AMZ2Q86W34 360 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 GALNT13Q8IUC8 556 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 ADHFE1Q8IWW8 467 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PARP9Q8IXQ6 854 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 CFAP206Q8IYR0 622 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TEX9Q8N6V9 391 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 ZNF454Q8N9F8 522 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TMEM145Q8NBT3 493 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 RBM15BQ8NDT2 890 aaKnown RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 OR2T11Q8NH01 316 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 OR14C36Q8NHC7 312 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 CFAP61Q8NHU2 1237 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 FBXO27Q8NI29 283 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 AGR3Q8TD06 166 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SETD7Q8WTS6 366 aaKnown RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 FOXJ1Q92949 421 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 EXT2Q93063 718 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 FCRL1Q96LA6 429 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 OR4K3Q96R72 315 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 KCNA7Q96RP8 456 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 UHRF1Q96T88 793 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 PKP4Q99569 1192 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 H2AFJQ9BTM1 129 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 APOOQ9BUR5 198 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 C1QTNF7Q9BXJ2 289 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SLC6A17Q9H1V8 727 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 EHD1Q9H4M9 534 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 WDR26Q9H7D7 661 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SLC40A1Q9NP59 571 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PHPT1Q9NRX4 125 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 DNAJC11Q9NVH1 559 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 SIRT5Q9NXA8 310 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 WSB2Q9NYS7 404 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 STOX2Q9P2F5 926 aaPredicted RBP6.61□□□□□ -1.35
MSH5-217ENST00000494458 OPTCQ9UBM4 332 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 POLG2Q9UHN1 485 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 NCKAP1Q9Y2A7 1128 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TMEM98Q9Y2Y6 226 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 TIMM22Q9Y584 194 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 CAPN7Q9Y6W3 813 aa6.61□□□□□ -1.35
MSH5-217ENST00000494458 A0A088AWK7 358 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 KRBA1A5PL33 1030 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 E7ENX8 843 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 MANBAO00462 879 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 STK25O00506 426 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 LSM1O15116 133 aaKnown RBP6.6□□□□□ -1.35
MSH5-217ENST00000494458 CCNT2O60583 730 aaKnown RBP6.6□□□□□ -1.35
MSH5-217ENST00000494458 CLDN9O95484 217 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 SLC16A8O95907 504 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 IGHV4-34P06331 123 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 HGFP14210 728 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 IDO1P14902 403 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 JUPP14923 745 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 NPPBP16860 134 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 NCF2P19878 526 aaPredicted RBP6.6□□□□□ -1.35
MSH5-217ENST00000494458 ACSL1P33121 698 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 HSD17B2P37059 387 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 PREPP48147 710 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 CCNG1P51959 295 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 PPP2CBP62714 309 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ERVK-8P63133 956 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 PPP2CAP67775 309 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 TAP2Q03519 686 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ZP2Q05996 745 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ABRQ12979 859 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 GTF2H3Q13889 308 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 LRP8Q14114 963 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 NFE2L1Q14494 772 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ABRAXAS2Q15018 415 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 CCSMST1Q4G0I0 132 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 PDCD4Q53EL6 469 aaKnown RBP6.6□□□□□ -1.35
MSH5-217ENST00000494458 C6orf136Q5SQH8 315 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 C10orf62Q5T681 223 aaPredicted RBP6.6□□□□□ -1.35
MSH5-217ENST00000494458 AGTRAPQ6RW13 159 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ABRAXAS1Q6UWZ7 409 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 SLCO4C1Q6ZQN7 724 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 ABI3BPQ7Z7G0 1075 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 TRAPPC5Q8IUR0 188 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 RGL4Q8IZJ4 473 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 GJD3Q8N144 294 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 SFRP1Q8N474 314 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 CDYL2Q8N8U2 506 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 OR9A1PQ8NGU1 263 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 OR5K2Q8NHB8 316 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 FAM174AQ8TBP5 190 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 WDR20Q8TBZ3 569 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 METTL6Q8TCB7 284 aa6.6□□□□□ -1.35
MSH5-217ENST00000494458 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms