RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 STC2O76061 302 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PRAMEF1O95521 474 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SNAP29O95721 258 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 RB1P06400 928 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 GNAO1P09471 354 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HIST1H2AGP0C0S8 130 aaPredicted RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HSD3B1P14060 373 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SLC2A4P14672 509 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HIST1H2ADP20671 130 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 IGFBP4P22692 258 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HSD3B2P26439 372 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SERPINA4P29622 427 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SLC6A4P31645 630 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 MAGEA2P43356 314 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 AGTR2P50052 363 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CCR3P51677 355 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HK3P52790 923 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CLDN8P56748 225 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 OR4D2P58180 307 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 C21orf58P58505 322 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 RPL38P63173 70 aaKnown RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 SRSF11Q05519 484 aaKnown RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 BCL2L1Q07817 233 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 TRAF2Q12933 501 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 NFATC3Q12968 1075 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PMS2P3Q13401 168 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 ELOAQ14241 798 aaKnown RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 ZNF846Q147U1 533 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 C16orf72Q14CZ0 275 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 RUNDC3AQ59EK9 446 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SDHAF4Q5VUM1 108 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 GPR107Q5VW38 600 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 C16orf87Q6PH81 154 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SLC2A7Q6PXP3 512 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 SERPINA11Q86U17 422 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 ITIH5Q86UX2 942 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CRIPAKQ8N1N5 446 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 ITFG2Q969R8 447 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 FAM120BQ96EK7 910 aaKnown RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 CMTM7Q96FZ5 175 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 FBXL20Q96IG2 436 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HIST1H2AHQ96KK5 128 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 HIST1H2AJQ99878 128 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 H2AFJQ9BTM1 129 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CIPCQ9C0C6 399 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 SLC32A1Q9H598 525 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PARVBQ9HBI1 364 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 LHX3Q9UBR4 397 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 CRLS1Q9UJA2 301 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PTGDR2Q9Y5Y4 395 aa11.24□□□□□ -0.61
RFC4-214ENST00000494047 PRRC2BQ5JSZ5 2229 aaKnown RBP11.24□□□□□ -0.61
RFC4-214ENST00000494047 COL6A3P12111 3177 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 GLYATL1P3A0A0U1RQE8 302 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 A0A1B0GVG6 124 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 LRRC14BA6NHZ5 514 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CFAP99D6REC4 459 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 SEC24DO94855 1032 aaPredicted RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 TRBC1P01850 177 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 SRPRAP08240 638 aaKnown RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 PIRTP0C851 137 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 SPATA31D3P0C874 917 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CYP2A7P20853 494 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 S100A3P33764 101 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 KCNQ1P51787 676 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 ARF5P84085 180 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 TEKQ02763 1124 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 GSTM4Q03013 218 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CSTF3Q12996 717 aaKnown RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 DUSP4Q13115 394 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CDH18Q13634 790 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 C6orf141Q5SZD1 244 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CXorf57Q6NSI4 855 aaKnown RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 KLHL35Q6PF15 583 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 RNF19BQ6ZMZ0 732 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 SPATA31D4Q6ZUB0 917 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 SERPINA9Q86WD7 417 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 ANKRD13BQ86YJ7 626 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 DENND1CQ8IV53 801 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 FAM217AQ8IXS0 508 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 ARL10Q8N8L6 244 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 OR52B6Q8NGF0 335 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 ATL1Q8WXF7 558 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 FIG4Q92562 907 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 NELL1Q92832 810 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
RFC4-214ENST00000494047 NCLNQ969V3 563 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 RHBDF1Q96CC6 855 aa11.23□□□□□ -0.61
RFC4-214ENST00000494047 TEX37Q96LM6 180 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms