RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ATL1Q8WXF7 558 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 ESAMQ96AP7 390 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 FAM107BQ9H098 131 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TCEAL2Q9H3H9 227 aaPredicted RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 EML4Q9HC35 981 aaKnown RBP12.31□□□□□ -0.44
VPS52-220ENST00000493674 PNPOQ9NVS9 261 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 WWOXQ9NZC7 414 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 TBC1D29Q9UFV1 150 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 ZDHHC2Q9UIJ5 367 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 ZNF225Q9UK10 706 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 PSMD13Q9UNM6 376 aa12.31□□□□□ -0.44
VPS52-220ENST00000493674 A0A1B0GTL3 188 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 MATN2O00339 956 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 IFRD1O00458 451 aaPredicted RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 PPP6CO00743 305 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 OR7A17O14581 309 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 STK16O75716 305 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 MLYCDO95822 493 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 EML2O95834 649 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SLC16A8O95907 504 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 RPN2P04844 631 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
VPS52-220ENST00000493674 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 RPL14P50914 215 aaKnown RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 BLKP51451 505 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 CDH13P55290 713 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 PKNOX1P55347 436 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SH3BP2P78314 561 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 GTF2H2Q13888 395 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 RPE65Q16518 533 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 PLK5Q496M5 336 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 GKAP1Q5VSY0 366 aaPredicted RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 GTF2H2CQ6P1K8 395 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 AGTRAPQ6RW13 159 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 LAYNQ6UX15 382 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 GOLGA7Q7Z5G4 137 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 CUZD1Q86UP6 607 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 ANKS4BQ8N8V4 417 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 CCL4L1Q8NHW4 92 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 RAD51AP1Q96B01 352 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SEC16BQ96JE7 1060 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 ZC3H10Q96K80 434 aaKnown RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 LRRC61Q9BV99 259 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SGPP1Q9BX95 441 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 TWSG1Q9GZX9 223 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 TRIT1Q9H3H1 467 aaKnown RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 OSGEPL1Q9H4B0 414 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SLC32A1Q9H598 525 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 CAAP1Q9H8G2 361 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 PRDM8Q9NQV8 689 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 SCHIP1Q9P0W5 487 aaPredicted RBP12.3□□□□□ -0.44
VPS52-220ENST00000493674 SPATA7Q9P0W8 599 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 OPTCQ9UBM4 332 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 ASF1AQ9Y294 204 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 STK38LQ9Y2H1 464 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 PCDHGA2Q9Y5H1 932 aa12.3□□□□□ -0.44
VPS52-220ENST00000493674 PABPN1LA6NDY0 278 aaKnown RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 SCAMP1O15126 338 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 BCAT2O15382 392 aaPredicted RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 HRO43593 1189 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ESRRBO95718 433 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 CSF2P04141 144 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 SP9P0CG40 484 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 MTHFD1P11586 935 aaKnown RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 F3P13726 295 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 CNR2P34972 360 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 NBL1P41271 181 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ACTR1BP42025 376 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 AFF3P51826 1226 aaKnown RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 INHBCP55103 352 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ACTR1AP61163 376 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 NHLH1Q02575 133 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ILF3Q12906 894 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS52-220ENST00000493674 SRSF5Q13243 272 aaKnown RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 E2F2Q14209 437 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ARHGAP19Q14CB8 494 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 CYP2A13Q16696 494 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 PTCHD3Q3KNS1 767 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 UGT3A2Q3SY77 523 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 KANK2Q63ZY3 851 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 DUS1LQ6P1R4 473 aaKnown RBP12.29□□□□□ -0.44
VPS52-220ENST00000493674 RD3Q7Z3Z2 195 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 HMGCLL1Q8TB92 370 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 TRPC4APQ8TEL6 797 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 FAR2Q96K12 515 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 C12orf66Q96MD2 445 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
VPS52-220ENST00000493674 NTMT1Q9BV86 223 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms