RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 OR52E1Q8NGJ3 308 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 OR5K2Q8NHB8 316 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 WDR36Q8NI36 951 aaKnown RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 LCN9Q8WX39 176 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 NCSTNQ92542 709 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 UBXN4Q92575 508 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 MRRFQ96E11 262 aaKnown RBP11.26□□□□□ -0.61
CTSA-209ENST00000493522 MED8Q96G25 268 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 TMEM74Q96NL1 305 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 RBBP8Q99708 897 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 OLFM1Q99784 485 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 DPYSL5Q9BPU6 564 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 CLMPQ9H6B4 373 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 ANKZF1Q9H8Y5 726 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 LATS2Q9NRM7 1088 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 CIDEBQ9UHD4 219 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 PLAGL1Q9UM63 463 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 DHRS7Q9Y394 339 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 NFS1Q9Y697 457 aa11.26□□□□□ -0.61
CTSA-209ENST00000493522 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 A0A1W2PNU3 283 aaPredicted RBP11.25□□□□□ -0.61
CTSA-209ENST00000493522 CDRT15L2A8MXV6 281 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 SLC28A2O43868 658 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 KDM1AO60341 852 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 FAM153BP0C7A2 387 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 MYBL2P10244 700 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 MPSTP25325 297 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 RGS4P49798 205 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 GFERP55789 205 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 TUBB4BP68371 445 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 FAM153CQ494X1 144 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 LRRC8EQ6NSJ5 796 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 ARMC6Q6NXE6 501 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 CYS1Q717R9 158 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 PIWIL4Q7Z3Z4 852 aaKnown RBP11.25□□□□□ -0.61
CTSA-209ENST00000493522 TMPRSS9Q7Z410 1059 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 CLEC14AQ86T13 490 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 OOSP2Q86WS3 158 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 UHMK1Q8TAS1 419 aaKnown RBP11.25□□□□□ -0.61
CTSA-209ENST00000493522 ZFPM2Q8WW38 1151 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 LINGO1Q96FE5 620 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 CCDC74BQ96LY2 380 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 CYTH2Q99418 400 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 STRADBQ9C0K7 418 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 SEMA6CQ9H3T2 930 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 SRMSQ9H3Y6 488 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 ACSS3Q9H6R3 686 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 TMEM9Q9P0T7 183 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 KLHL42Q9P2K6 505 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 POLG2Q9UHN1 485 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 ICKQ9UPZ9 632 aa11.25□□□□□ -0.61
CTSA-209ENST00000493522 MN1Q10571 1320 aaPredicted RBP11.25□□□□□ -0.61
CTSA-209ENST00000493522 HEATR5BQ9P2D3 2071 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 NAV2Q8IVL1 2488 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 A0A087WUV0 522 aaPredicted RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 CCDC187A0A096LP49 1063 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 IGHV5-10-1A0A0J9YXX1 117 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 GSAPA4D1B5 854 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 OR6C74A6NCV1 312 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 OR5K3A6NET4 321 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TMX2-CTNND1H3BSU7 103 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 EIF3FO00303 357 aaPredicted RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 FAM155BO75949 473 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TNFSF15O95150 251 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 CATP04040 527 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 ITGA2BP08514 1039 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 CBSLP0DN79 551 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 THRAP10827 490 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 CCKBRP32239 447 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 SHMT2P34897 504 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 SPRP35270 261 aaPredicted RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 CBSP35520 551 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 CCNFP41002 786 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 SKIV2L2P42285 1042 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 PGGT1BP53609 377 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 LIMK2P53671 638 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 PMS2P54278 862 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 PPP1CAP62136 330 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TIAL1Q01085 375 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTSA-209ENST00000493522 KCNC4Q03721 635 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 ILF2Q12905 390 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 PRKAA1Q13131 559 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 ZNF460Q14592 562 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 KIAA1614Q5VZ46 1190 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TMEM71Q6P5X7 295 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TTC23LQ6PF05 361 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 WDR74Q6RFH5 385 aaPredicted RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 NEK10Q6ZWH5 1172 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 TRMT10CQ7L0Y3 403 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 PLXDC1Q8IUK5 500 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 SLITRK4Q8IW52 837 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 MYO1HQ8N1T3 1032 aa11.24□□□□□ -0.61
CTSA-209ENST00000493522 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
CTSA-209ENST00000493522 OR4E2Q8NGC2 313 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms