RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 SGO1Q5FBB7 561 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 KLHL35Q6PF15 583 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 B3GNT6Q6ZMB0 384 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 USP30Q70CQ3 517 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 KCNJ9Q92806 393 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERC4-211ENST00000492996 RSPRY1Q96DX4 576 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 ALG14Q96F25 216 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 CNBD2Q96M20 576 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 EGFL8Q99944 293 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 ASAH2Q9NR71 780 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 HCFC1R1Q9NWW0 138 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 HACD3Q9P035 362 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 C6orf203Q9P0P8 240 aaPredicted RBP6.87□□□□□ -1.31
HERC4-211ENST00000492996 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 CRLS1Q9UJA2 301 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 VPS9D1Q9Y2B5 631 aa6.87□□□□□ -1.31
HERC4-211ENST00000492996 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
HERC4-211ENST00000492996 FFAR3O14843 346 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 GPR42O15529 346 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 FZD6O60353 706 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 DXOO77932 396 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 SLC25A14O95258 325 aaPredicted RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 CHEK2O96017 543 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 LRG1P02750 347 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ESR1P03372 595 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 HMGCLP35914 325 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 P2RY2P41231 377 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 HSPA7P48741 367 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ERVPABLB-1P60509 514 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 UFM1P61960 85 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CACNG1Q06432 222 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 PDK3Q15120 406 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TLR1Q15399 786 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CHRNA6Q15825 494 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TIGD2Q4W5G0 525 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 PDCD4Q53EL6 469 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 AARS2Q5JTZ9 985 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 C6orf52Q5T4I8 152 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 OGFRL1Q5TC84 451 aaPredicted RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 PARM1Q6UWI2 310 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 GPRIN3Q6ZVF9 776 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 PHYKPLQ8IUZ5 450 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 DCAF4L2Q8NA75 395 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 FNDC5Q8NAU1 212 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 PCYOX1LQ8NBM8 494 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 OR2T11Q8NH01 316 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 METTL6Q8TCB7 284 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 EME1Q96AY2 570 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ASB9Q96DX5 294 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TPK1Q9H3S4 243 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 IL26Q9NPH9 171 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ABCB8Q9NUT2 735 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 RIMS3Q9UJD0 308 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 INTS6Q9UL03 887 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 AURKCQ9UQB9 309 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 NDUFAF1Q9Y375 327 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 AP4S1Q9Y587 144 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 V9GYQ6 96 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 NUP214P35658 2090 aaPredicted RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 NME4O00746 187 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CCL16O15467 120 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 SYNCRIPO60506 623 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 TIPRLO75663 272 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 APBB3O95704 486 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 ESRRBO95718 433 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CAPN1P07384 714 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CEACAM1P13688 526 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 NELFEP18615 380 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 CCR2P41597 374 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CLCN7P51798 805 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 GSTA3Q16772 222 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 RABL3Q5HYI8 236 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 LETMD1Q6P1Q0 360 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 IL27RAQ6UWB1 636 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 MBOAT1Q6ZNC8 495 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 RBM44Q6ZP01 1051 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 DDHD1Q8NEL9 900 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 OR56A4Q8NGH8 313 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 SKA2Q8WVK7 121 aaPredicted RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 NCSTNQ92542 709 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 FGF14Q92915 247 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 NACC2Q96BF6 587 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 HEPHQ9BQS7 1158 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 PARVBQ9HBI1 364 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 PALMDQ9NP74 551 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 APPL1Q9UKG1 709 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CCL26Q9Y258 94 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 C5orf42Q9H799 3197 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TSPAN11A1L157 253 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 E2F3O00716 465 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 CASQ2O14958 399 aaPredicted RBP6.86□□□□□ -1.31
HERC4-211ENST00000492996 TRIM24O15164 1050 aa6.86□□□□□ -1.31
HERC4-211ENST00000492996 TRBC1P01850 177 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms