RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ARHGEF33A8MVX0 844 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 MAP3K7O43318 606 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 FAM155BO75949 473 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 DXOO77932 396 aaKnown RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 FGF3P11487 239 aaPredicted RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 PKLRP30613 574 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 ETV5P41161 510 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 TAS2R39P59534 338 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 POU4F1Q01851 419 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 GRB7Q14451 532 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCM2-217ENST00000492883 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 OR9A1PQ8NGU1 263 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 ZCCHC14Q8WYQ9 949 aaKnown RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 USP7Q93009 1102 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 ZNF578Q96N58 590 aaPredicted RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 TAAR9Q96RI9 348 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 RBBP8Q99708 897 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 C1GALT1Q9NS00 363 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
CCM2-217ENST00000492883 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
CCM2-217ENST00000492883 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.24
CCM2-217ENST00000492883 KRT87PA6NCN2 255 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 PABPN1LA6NDY0 278 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 B4E171 279 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 GFYI3L273 518 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 ZBTB11O95625 1053 aaPredicted RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 C8GP07360 202 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 FAM153BP0C7A2 387 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 TSPAN7P41732 249 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 PMS2P54278 862 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 FOXM1Q08050 763 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 ZNF460Q14592 562 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 KIR2DS3Q14952 304 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 FAM153CQ494X1 144 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 ANKS6Q68DC2 871 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 IGF2-ASQ6U949 168 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 TRMT10CQ7L0Y3 403 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 TAX1BP1Q86VP1 789 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 CARFQ8N187 725 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 NKAPQ8N5F7 415 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 OR2L8Q8NGY9 312 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 UHMK1Q8TAS1 419 aaKnown RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 FGF11Q92914 225 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 PKP4Q99569 1192 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 MCMBPQ9BTE3 642 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 MENTQ9BUN1 341 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 ACSS3Q9H6R3 686 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 CAB39LQ9H9S4 337 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 GPAMQ9HCL2 828 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 SPHK1Q9NYA1 384 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 SPATA7Q9P0W8 599 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.52□□□□□ -0.25
CCM2-217ENST00000492883 SEMA5BQ9P283 1151 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 DKK4Q9UBT3 224 aa13.52□□□□□ -0.25
CCM2-217ENST00000492883 ARHGEF17Q96PE2 2063 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 SLC9B1P1A6NJY1 282 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 MYO1CO00159 1063 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 POLR1CO15160 346 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 SLC16A5O15375 505 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 HIST1H2AGP0C0S8 130 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 UGT2B7P16662 529 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 STMN1P16949 149 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 ZNF37AP17032 561 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 HIST1H2ADP20671 130 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 CYP2A7P20853 494 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 SLC5A2P31639 672 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 HSD17B2P37059 387 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 RAB15P59190 212 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 SH3BP2P78314 561 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 HSD11B2P80365 405 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 MC2RQ01718 297 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 TSTA3Q13630 321 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 SF1Q15637 639 aaKnown RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 TMTC4Q5T4D3 741 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 DCAF12Q5T6F0 453 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 UBAP2Q5T6F2 1119 aaKnown RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 SPESP1Q6UW49 350 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 TMEM207Q6UWW9 146 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 CEP97Q8IW35 865 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms