RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CYP4F3Q08477 520 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 PWP1Q13610 501 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 NEDD8Q15843 81 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 MACC1Q6ZN28 852 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 USP45Q70EL2 814 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 LPCAT2Q7L5N7 544 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 FAM217AQ8IXS0 508 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-220ENST00000492280 PPP3R2Q96LZ3 170 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 MTERF1Q99551 399 aaKnown RBP12.15□□□□□ -0.46
HMGN1-220ENST00000492280 ZBP1Q9H171 429 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 ASAH2Q9NR71 780 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 SMPD3Q9NY59 655 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-220ENST00000492280 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 EIF3LQ9Y262 564 aaKnown RBP12.15□□□□□ -0.46
HMGN1-220ENST00000492280 CCDC88CQ9P219 2028 aa12.15□□□□□ -0.46
HMGN1-220ENST00000492280 ANXA5P08758 320 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 IL7RP16871 459 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 LAG3P18627 525 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 HTR1EP28566 365 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 SHMT2P34897 504 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 PPP3CCP48454 512 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 CLCN2P51788 898 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 LRRC26Q2I0M4 334 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 SLC36A3Q495N2 470 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 INTS11Q5TA45 600 aaKnown RBP12.15□□□□□ -0.47
HMGN1-220ENST00000492280 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.47
HMGN1-220ENST00000492280 DPP10Q8N608 796 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 ZFAND2BQ8WV99 257 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 ELMO1Q92556 727 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 NAA50Q9GZZ1 169 aaKnown RBP12.15□□□□□ -0.47
HMGN1-220ENST00000492280 ELOVL6Q9H5J4 265 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 CLK4Q9HAZ1 481 aaKnown RBP12.15□□□□□ -0.47
HMGN1-220ENST00000492280 PARVBQ9HBI1 364 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 ADGRE2Q9UHX3 823 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 PPT2Q9UMR5 302 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 DMTF1Q9Y222 760 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.47
HMGN1-220ENST00000492280 UPK1AO00322 258 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 PLK4O00444 970 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 LEFTY1O75610 366 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 PRKD3O94806 890 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 DIRAS1O95057 198 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 CLDN9O95484 217 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 TYRP14679 529 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 HALP42357 657 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 MTHFRP42898 656 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 CASP9P55211 416 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 PIGFQ07326 219 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ABRQ12979 859 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 B3GNT6Q6ZMB0 384 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 SPRED1Q7Z699 444 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 FAM162AQ96A26 154 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ZSWIM3Q96MP5 696 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 MUS81Q96NY9 551 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 TCF25Q9BQ70 676 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 PFDN4Q9NQP4 134 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 AASSQ9UDR5 926 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 COQ6Q9Y2Z9 468 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 NINQ8N4C6 2090 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 TCF20Q9UGU0 1960 aaKnown RBP12.14□□□□□ -0.47
HMGN1-220ENST00000492280 H0Y858 1186 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 LILRB3O75022 631 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 LATS1O95835 1130 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ANXA6P08133 673 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 GGT1P19440 569 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 SPINT3P49223 89 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 SLC7A9P82251 487 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 USP39Q53GS9 565 aaKnown RBP12.14□□□□□ -0.47
HMGN1-220ENST00000492280 OR4F3Q6IEY1 312 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ZNF551Q7Z340 670 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-220ENST00000492280 CACUL1Q86Y37 369 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ZNF548Q8NEK5 533 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-220ENST00000492280 OR2A12Q8NGT7 310 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 ZBTB18Q99592 522 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 KCTD5Q9NXV2 234 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 INVSQ9Y283 1065 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
HMGN1-220ENST00000492280 FADS2P1A8MWK0 482 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CLTBP09497 229 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CD22P20273 847 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PIGAP37287 484 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 BDKRB1P46663 353 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CTSCP53634 463 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 PRMT2P55345 433 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 GRIK2Q13002 908 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CARD16Q5EG05 197 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 TCEAL5Q5H9L2 206 aa12.13□□□□□ -0.47
HMGN1-220ENST00000492280 CACHD1Q5VU97 1274 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms