RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ETNK1Q9HBU6 452 aa8.46□□□□□ -1.06
NUP50-217ENST00000491860 EIF2B3Q9NR50 452 aaKnown RBP8.46□□□□□ -1.06
NUP50-217ENST00000491860 RAB6BQ9NRW1 208 aa8.46□□□□□ -1.06
NUP50-217ENST00000491860 TXLNGQ9NUQ3 528 aa8.46□□□□□ -1.06
NUP50-217ENST00000491860 NDOR1Q9UHB4 597 aa8.46□□□□□ -1.06
NUP50-217ENST00000491860 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
NUP50-217ENST00000491860 SPENQ96T58 3664 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 CCDC162PA2VCL2 907 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 ISM1B1AKI9 464 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 PRMT5O14744 637 aaPredicted RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 ZSCAN9O15535 394 aaPredicted RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 NRDCO43847 1150 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 GOT2P00505 430 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 APRTP07741 180 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CCNFP41002 786 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 FOLR3P41439 243 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CCL11P51671 97 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 RPS18P62269 152 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 SARNPP82979 210 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 CDK16Q00536 496 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 ABRQ12979 859 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 RPS6KA1Q15418 735 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 IGFBP7Q16270 282 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 ZNF789Q5FWF6 425 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 ZC3H12BQ5HYM0 836 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 TCTE1Q5JU00 501 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 PCID2Q5JVF3 399 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 FAM198BQ6UWH4 519 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CDHR3Q6ZTQ4 885 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 TMEM135Q86UB9 458 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 DCUN1D3Q8IWE4 304 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CLEC1AQ8NC01 280 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 OR13J1Q8NGT2 312 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CPT1CQ8TCG5 803 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 HDAC10Q969S8 669 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 FOPNLQ96NB1 174 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 OR2A14Q96R47 310 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CASS4Q9NQ75 786 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CATSPERZQ9NTU4 200 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 IRAK4Q9NWZ3 460 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 GPR83Q9NYM4 423 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 IL1RAPL1Q9NZN1 696 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 BFARQ9NZS9 450 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 GNPTGQ9UJJ9 305 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 PACSIN2Q9UNF0 486 aaPredicted RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 PLCL2Q9UPR0 1127 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 DRG1Q9Y295 367 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 R3HDM2Q9Y2K5 976 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 TDRKHQ9Y2W6 561 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 TCAF1Q9Y4C2 921 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 CAPN6Q9Y6Q1 641 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 ANKRD12Q6UB98 2062 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 SPTAN1Q13813 2472 aaKnown RBP8.45□□□□□ -1.06
NUP50-217ENST00000491860 MED13Q9UHV7 2174 aa8.45□□□□□ -1.06
NUP50-217ENST00000491860 BLACEA4D250 179 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 TARM1B6A8C7 271 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 BHMG1C9JSJ3 638 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 H3BMM5 538 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 GPC4O75487 556 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ALBP02768 609 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 CAPN1P07384 714 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ITGAXP20702 1163 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 RPS3P23396 243 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP50-217ENST00000491860 PTGIRP43119 386 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 NPY2RP49146 381 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 HSPA14Q0VDF9 509 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 CCNG2Q16589 344 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 KYNUQ16719 465 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 CCDC38Q502W7 563 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 RNF187Q5TA31 235 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 VWA5B1Q5TIE3 1220 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ZNF385CQ66K41 422 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 MRNIPQ6NTE8 343 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 FBXO38Q6PIJ6 1188 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ZNF662Q6ZS27 426 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 SDCCAG8Q86SQ7 713 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 OR2Y1Q8NGV0 311 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 OR2L8Q8NGY9 312 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 NAT14Q8WUY8 206 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ATG4AQ8WYN0 398 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 PNPLA2Q96AD5 504 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ZUFSPQ96AP4 578 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 FKBP10Q96AY3 582 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 RAD51AP1Q96B01 352 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 PTERQ96BW5 349 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 PPM1MQ96MI6 270 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 SMAD5Q99717 465 aaKnown RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 DESI2Q9BSY9 194 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 TRIM55Q9BYV6 548 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 XKR8Q9H6D3 395 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 AKIRIN1Q9H9L7 192 aaPredicted RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 LRRC4CQ9HCJ2 640 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 SLAMF7Q9NQ25 335 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
NUP50-217ENST00000491860 PIH1D1Q9NWS0 290 aaKnown RBP8.44□□□□□ -1.06
NUP50-217ENST00000491860 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms