RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NCKIPSDQ9NZQ3 722 aa21.15■□□□□ 0.98
VCPKMT-204ENST00000491402 CSNK1G3Q9Y6M4 447 aa21.15■□□□□ 0.98
VCPKMT-204ENST00000491402 TRBV23OR9-2A0A075B6M9 112 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 KIR2DS5A0A0G2JLQ3 304 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 A0A0G2JNG1 304 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 OR5K4A6NMS3 321 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 B4DGG1 531 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 KIR2DS3K7RE56 304 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 ANXA6P08133 673 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 SLC2A4P14672 509 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 MDH1P40925 334 aaKnown RBP21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 SLC19A1P41440 591 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 PRKAA2P54646 552 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 KIR2DS5Q14953 304 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 DEFB133Q30KQ1 61 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 AASDHQ4L235 1098 aaPredicted RBP21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 CDKL4Q5MAI5 379 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 SFRP1Q8N474 314 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 RAD51AP1Q96B01 352 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 CXorf40BQ96DE9 158 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 CCDC138Q96M89 665 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 TMEM237Q96Q45 408 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 PKP4Q99569 1192 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 TDRKHQ9Y2W6 561 aaKnown RBP21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 COLEC10Q9Y6Z7 277 aa21.14■□□□□ 0.97
VCPKMT-204ENST00000491402 PRAMEF33A0A0G2JMD5 474 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 GDF9O60383 454 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 TRIM13O60858 407 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 CER1O95813 267 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SLC16A8O95907 504 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 GRB7Q14451 532 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 KRT33BQ14525 404 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SETDB1Q15047 1291 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 FBXO48Q5FWF7 155 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SULT1C3Q6IMI6 304 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 OR9A1PQ8NGU1 263 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SLC37A2Q8TED4 501 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 EDEM2Q9BV94 578 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 PTBP2Q9UKA9 531 aaKnown RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 ARID1BQ8NFD5 2236 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 STX16-NPEPL1H3BU86 382 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 CDX4O14627 284 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 STX16O14662 325 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 YKT6O15498 198 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 FGF3P11487 239 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 NEFHP12036 1026 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 XRCC1P18887 633 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 NDUFS1P28331 727 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 AGTR2P50052 363 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 HNMTP50135 292 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 DNAJB13P59910 316 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 PDK4Q16654 411 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SREK1Q8WXA9 508 aaKnown RBP21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 POT1Q9NUX5 634 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 WWOXQ9NZC7 414 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 POLG2Q9UHN1 485 aa21.13■□□□□ 0.97
VCPKMT-204ENST00000491402 SIX3O95343 332 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 BGNP21810 368 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 IMPA1P29218 277 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 HERVK_113P63132 956 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 CHI3L2Q15782 390 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 ZXDCQ2QGD7 858 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 C18orf21Q32NC0 220 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 ZCCHC23Q6ZST2 131 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 KANSL1Q7Z3B3 1105 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 RAB44Q7Z6P3 723 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 TRIM48Q8IWZ4 208 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 TCAIMQ8N3R3 496 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 SAP25Q8TEE9 199 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 CKAP2Q8WWK9 683 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 ESAMQ96AP7 390 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 FBXL8Q96CD0 374 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 TMEM79Q9BSE2 394 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 ERVK-6Q9BXR3 956 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 STOX2Q9P2F5 926 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 CPNE7Q9UBL6 633 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 PLAGL1Q9UM63 463 aa21.12■□□□□ 0.97
VCPKMT-204ENST00000491402 GOLGA4Q13439 2230 aaKnown RBP21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 TAPBPO15533 448 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 GIMD1P0DJR0 217 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 CCT8P50990 548 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 NAGLUP54802 743 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 UBE2IP63279 158 aaKnown RBP21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 TTC19Q6DKK2 380 aaPredicted RBP21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 GATAD2AQ86YP4 633 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 ATL1Q8WXF7 558 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 L3HYPDHQ96EM0 354 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 MOCOSQ96EN8 888 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 CAMK1GQ96NX5 476 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 MENTQ9BUN1 341 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 KIR3DX1Q9H7L2 352 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 SLC40A1Q9NP59 571 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 ACSS2Q9NR19 701 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 ASB1Q9Y576 335 aa21.11■□□□□ 0.97
VCPKMT-204ENST00000491402 LRRC14BA6NHZ5 514 aa21.1■□□□□ 0.97
VCPKMT-204ENST00000491402 NOBOXO60393 691 aa21.1■□□□□ 0.97
VCPKMT-204ENST00000491402 FOXD2O60548 495 aaPredicted RBP21.1■□□□□ 0.97
VCPKMT-204ENST00000491402 IMPDH1P20839 514 aa21.1■□□□□ 0.97
VCPKMT-204ENST00000491402 EEF1DP29692 281 aaKnown RBP21.1■□□□□ 0.97
VCPKMT-204ENST00000491402 ASPHQ12797 758 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms