RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 KCPQ6ZWJ8 1503 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 MRC1P22897 1456 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 UBN2Q6ZU65 1347 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 KPNA7A9QM74 516 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 GCNT3O95395 438 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 CLDN1O95832 211 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 LDHAP00338 332 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 HMGB1P09429 215 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 HNRNPA1P09651 372 aaKnown RBP eCLIP3.3□□□□□ -1.88
PHC3-213ENST00000491258 MYL6BP14649 208 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 EIF2S2P20042 333 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 ARL1P40616 181 aaPredicted RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 PAFAH1B1P43034 410 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 DDX10Q13206 875 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 DRP2Q13474 957 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 E2F5Q15329 346 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 PARP10Q53GL7 1025 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 FAM69AQ5T7M9 428 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 KIF6Q6ZMV9 814 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 DENND5BQ6ZUT9 1274 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 COPS6Q7L5N1 327 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 ADGRA1Q86SQ6 560 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 GPALPP1Q8IXQ4 340 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 SLC39A11Q8N1S5 342 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 ZPLD1Q8TCW7 415 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 ZFAND2BQ8WV99 257 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 RASL10AQ92737 203 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 SAAL1Q96ER3 474 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 RPS6KC1Q96S38 1066 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 PSMD1Q99460 953 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 UTP14AQ9BVJ6 771 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 TRIM6Q9C030 488 aaPredicted RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 TMEM39BQ9GZU3 492 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 RANBP17Q9H2T7 1088 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 INTS9Q9NV88 658 aaKnown RBP3.3□□□□□ -1.88
PHC3-213ENST00000491258 ERAP1Q9NZ08 941 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 NUDT4Q9NZJ9 180 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 MON2Q7Z3U7 1717 aa3.3□□□□□ -1.88
PHC3-213ENST00000491258 PASKQ96RG2 1323 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 ZNF541Q9H0D2 1346 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 MAPK8IP3Q9UPT6 1336 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 ZNF646O15015 1829 aaPredicted RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 PLPP2O43688 288 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 BBOX1O75936 387 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 PGFP49763 221 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 KRTAP10-1P60331 282 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 RPS18P62269 152 aaKnown RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 LMOD3Q0VAK6 560 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 ELAVL2Q12926 359 aaKnown RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 PPP1R42Q7Z4L9 355 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 GPC2Q8N158 579 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 KBTBD8Q8NFY9 601 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 NSL1Q96IY1 281 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 ARPC5LQ9BPX5 153 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 FLRT3Q9NZU0 649 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 CNOT8Q9UFF9 292 aaKnown RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 HACL1Q9UJ83 578 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 TBX20Q9UMR3 447 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 ATP6V0A2Q9Y487 856 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 TMEM184BQ9Y519 407 aaPredicted RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 RGPD3A6NKT7 1758 aaPredicted RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 RGPD4Q7Z3J3 1758 aa3.29□□□□□ -1.88
PHC3-213ENST00000491258 CICQ96RK0 1608 aaPredicted RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 GOLGB1Q14789 3259 aaKnown RBP3.29□□□□□ -1.88
PHC3-213ENST00000491258 AKAP12Q02952 1782 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ABCC12Q96J65 1359 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 WDR90Q96KV7 1748 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ASTN2O75129 1339 aaPredicted RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 OR2M5A3KFT3 312 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 TNFSF14O43557 240 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 NXPH2O95156 264 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 HOXB7P09629 217 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ZSCAN5DPP0CG00 497 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ZNF853P0CG23 659 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ACADMP11310 421 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 HRH2P25021 359 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 EPHX2P34913 555 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 EPS15P42566 896 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 LIMK2P53671 638 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 F2RL1P55085 397 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 EIF3BP55884 814 aaKnown RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 AIMP1Q12904 312 aaKnown RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 BIRC2Q13490 618 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 KCTD2Q14681 263 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 HSP90AB3PQ58FF7 597 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 LRRTM4Q86VH4 590 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 HPS6Q86YV9 775 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 LSMEM2Q8N112 164 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 CNTROBQ8N137 903 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 NSMCE3Q96MG7 304 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 MIOSQ9NXC5 875 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 CWC15Q9P013 229 aaKnown RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 RCC2Q9P258 522 aaKnown RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 TRMT112Q9UI30 125 aaKnown RBP3.28□□□□□ -1.88
PHC3-213ENST00000491258 ZDHHC2Q9UIJ5 367 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 BAHCC1Q9P281 2608 aa3.28□□□□□ -1.88
PHC3-213ENST00000491258 ABCA7Q8IZY2 2146 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms