RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ALDOCP09972 364 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 GPX3P22352 226 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 ILF2Q12905 390 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 KIF19Q2TAC6 998 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 ATP13A5Q4VNC0 1218 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 ARHGAP22Q7Z5H3 698 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 CARM1Q86X55 608 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 FUNDC1Q8IVP5 155 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 ALDH16A1Q8IZ83 802 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 PTERQ96BW5 349 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 C3orf30Q96M34 536 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 PLEKHG4BQ96PX9 1271 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 RIOK2Q9BVS4 552 aaKnown RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 WSB2Q9NYS7 404 aaPredicted RBP22.25■■□□□ 1.15
USF3-203ENST00000491165 CRYL1Q9Y2S2 319 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 PLXND1Q9Y4D7 1925 aa22.25■■□□□ 1.15
USF3-203ENST00000491165 IGHV1OR15-9A0A0B4J2B8 117 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 LZTS3O60299 673 aaPredicted RBP22.24■■□□□ 1.15
USF3-203ENST00000491165 FDXRP22570 491 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 UGT3A2Q3SY77 523 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 FAM219BQ5XKK7 198 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 TSPAN14Q8NG11 270 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 EXT2Q93063 718 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 PPWD1Q96BP3 646 aaKnown RBP22.24■■□□□ 1.15
USF3-203ENST00000491165 C19orf43Q9BQ61 176 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 SLC39A3Q9BRY0 314 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 FAM83DQ9H4H8 585 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 C6orf106Q9H6K1 298 aaPredicted RBP22.24■■□□□ 1.15
USF3-203ENST00000491165 NOL11Q9H8H0 719 aaKnown RBP22.24■■□□□ 1.15
USF3-203ENST00000491165 AKTIPQ9H8T0 292 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 CD3EAPO15446 510 aaKnown RBP22.24■■□□□ 1.15
USF3-203ENST00000491165 CD1DP15813 335 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 NFATC2Q13469 925 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 ZNF284Q2VY69 593 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 ZRANB3Q5FWF4 1079 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 HMBOX1Q6NT76 420 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 AFTPHQ6ULP2 937 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 PLA2G15Q8NCC3 412 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 OR2T34Q8NGX1 318 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 CIB1Q99828 191 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 IER2Q9BTL4 223 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 PREBQ9HCU5 417 aa22.24■■□□□ 1.15
USF3-203ENST00000491165 CEP192Q8TEP8 1941 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 ZNF839A8K0R7 811 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 SEMA4FO95754 770 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 TDGF1P13385 188 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 DCDC1P59894 354 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 SH3BP2P78314 561 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 CYP2U1Q7Z449 544 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 RAB44Q7Z6P3 723 aaPredicted RBP22.23■■□□□ 1.15
USF3-203ENST00000491165 AP2M1Q96CW1 435 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 NUS1Q96E22 293 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 SLC29A1Q99808 456 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 TMEM79Q9BSE2 394 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 ASB8Q9H765 288 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 FZD3Q9NPG1 666 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 MBNL1Q9NR56 388 aaKnown RBP22.23■■□□□ 1.15
USF3-203ENST00000491165 CATSPERZQ9NTU4 200 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 DNAJC15Q9Y5T4 150 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 WDR87Q6ZQQ6 2873 aa22.23■■□□□ 1.15
USF3-203ENST00000491165 RAD51BO15315 384 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 CDH13P55290 713 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 RPS21P63220 83 aaKnown RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 RETREG3Q86VR2 466 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 HORMAD1Q86X24 394 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 MYO1HQ8N1T3 1032 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 PTGR2Q8N8N7 351 aaPredicted RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 ANKFN1Q8N957 763 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 GPR174Q9BXC1 333 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 C1QTNF2Q9BXJ5 285 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 SGK2Q9HBY8 427 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 PRMT8Q9NR22 394 aaPredicted RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 ARMC1Q9NVT9 282 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 ATXN10Q9UBB4 475 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 AGAP14A8MT82 685 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 NR5A2O00482 541 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 H6PDO95479 791 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 CD6P30203 668 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 GRIA3P42263 894 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 WSCD2Q2TBF2 565 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 KRT80Q6KB66 452 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 PRMT9Q6P2P2 845 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 CCT7Q99832 543 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 HOPXQ9BPY8 73 aaPredicted RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 GPATCH1Q9BRR8 931 aaKnown RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 C11orf16Q9NQ32 467 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 PNPLA3Q9NST1 481 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 NFKBIL1Q9UBC1 381 aaPredicted RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 MBD1Q9UIS9 605 aaPredicted RBP22.22■■□□□ 1.15
USF3-203ENST00000491165 NDUFAF1Q9Y375 327 aa22.22■■□□□ 1.15
USF3-203ENST00000491165 FAM86C2PA6NEL3 165 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 PDLIM1O00151 329 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 ZNF217O75362 1048 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 TIPRLO75663 272 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 CDK14O94921 469 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 FGF4P08620 206 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 KIAA1161Q6NSJ0 714 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 ZNF549Q6P9A3 640 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 ZBTB49Q6ZSB9 765 aa22.21■■□□□ 1.15
USF3-203ENST00000491165 C1orf210Q8IVY1 113 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms