RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANKRD22Q5VYY1 191 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 TRIM73Q86UV7 250 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 VRK3Q8IV63 474 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 MAGEC3Q8TD91 643 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 ZNF669Q96BR6 464 aaPredicted RBP16.87■□□□□ 0.29
SEC13-218ENST00000490283 LRFN5Q96NI6 719 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 OR2A14Q96R47 310 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 ACTL8Q9H568 366 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 CDYLQ9Y232 598 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 PIKFYVEQ9Y2I7 2098 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 FAM237BA0A1B0GVD1 139 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 CDC14CA4D256 554 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 E5RI56 91 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 TERTO14746 1132 aaKnown RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 RECKO95980 971 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 PLA2G2AP14555 144 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 PTPN4P29074 926 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 KYNUQ16719 465 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 ATP1A1-AS1Q5TC04 95 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 NEPROQ6NW34 567 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 FAM199XQ6PEV8 388 aaPredicted RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 CDHR3Q6ZTQ4 885 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 PRICKLE2Q7Z3G6 844 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 CAND1Q86VP6 1230 aaKnown RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 PPIL6Q8IXY8 311 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 OR1L3Q8NH93 324 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 LPGAT1Q92604 370 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 SERPINB12Q96P63 405 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 CCDC68Q9H2F9 335 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 STARD5Q9NSY2 213 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 INTS7Q9NVH2 962 aaKnown RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 INTS10Q9NVR2 710 aaKnown RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 IRAK4Q9NWZ3 460 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 SPHK1Q9NYA1 384 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.86■□□□□ 0.29
SEC13-218ENST00000490283 ASIC3Q9UHC3 531 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 MAD1L1Q9Y6D9 718 aa16.86■□□□□ 0.29
SEC13-218ENST00000490283 CTAGE9A4FU28 777 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 MEN1O00255 615 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 SLC28A2O43868 658 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 S1PR4O95977 384 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CHRM3P20309 590 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CD9P21926 228 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CCNFP41002 786 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 ADARP55265 1226 aaKnown RBP16.85■□□□□ 0.29
SEC13-218ENST00000490283 GPS2Q13227 327 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 ANKRD20A4Q4UJ75 823 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 ZNF470Q6ECI4 717 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 SYVN1Q86TM6 617 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CILP2Q8IUL8 1156 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 C9orf43Q8TAL5 461 aaPredicted RBP16.85■□□□□ 0.29
SEC13-218ENST00000490283 CALML6Q8TD86 181 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 RAD51AP1Q96B01 352 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CHRNA10Q9GZZ6 450 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 FARSAQ9Y285 508 aaKnown RBP16.85■□□□□ 0.29
SEC13-218ENST00000490283 MAN2B2Q9Y2E5 1009 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 CRYL1Q9Y2S2 319 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 AP1M2Q9Y6Q5 423 aa16.85■□□□□ 0.29
SEC13-218ENST00000490283 C9J4A7 227 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 J3QKU1 62 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 RASGRF2O14827 1237 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 ZNF185O15231 689 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 OR2B3O76000 313 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 TPBGLP0DKB5 382 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 AGXTP21549 392 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 CTSL3PQ5NE16 218 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 IZUMO3Q5VZ72 239 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 PCGF5Q86SE9 256 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 LMNTD2Q8IXW0 634 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 DSELQ8IZU8 1212 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 OR2L8Q8NGY9 312 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 GABPB2Q8TAK5 448 aaPredicted RBP16.84■□□□□ 0.29
SEC13-218ENST00000490283 BIRC8Q96P09 236 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 C17orf62Q9BQA9 187 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 DPH2Q9BQC3 489 aaPredicted RBP16.84■□□□□ 0.29
SEC13-218ENST00000490283 CHST8Q9H2A9 424 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 SNX7Q9UNH6 387 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 NEU2Q9Y3R4 380 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 COL6A6A6NMZ7 2263 aa16.84■□□□□ 0.29
SEC13-218ENST00000490283 ZNF749O43361 778 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 NIPSNAP2O75323 286 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 USP1O94782 785 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 RAB40ALP0C0E4 278 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 PKMP14618 531 aaKnown RBP16.83■□□□□ 0.28
SEC13-218ENST00000490283 ATP5DP30049 168 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 GNG11P61952 73 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 LONRF1Q17RB8 773 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 DEFB110Q30KQ9 67 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 TTLL9Q3SXZ7 439 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 PRAMEF17Q5VTA0 474 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 CNSTQ6PJW8 725 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 TMEM135Q86UB9 458 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 TAX1BP1Q86VP1 789 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 ZBTB2Q8N680 514 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 NAT8LQ8N9F0 302 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 SLC38A9Q8NBW4 561 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 THAP4Q8WY91 577 aa16.83■□□□□ 0.28
SEC13-218ENST00000490283 IL17FQ96PD4 163 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 603 ms