RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 FZD1Q9UP38 647 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 EXOC7Q9UPT5 735 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MRPS2Q9Y399 296 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PARD3Q8TEW0 1356 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PLEKHH1Q9ULM0 1364 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NHSQ6T4R5 1651 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ATP8B3O60423 1300 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CGNL1Q0VF96 1302 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RAD50Q92878 1312 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 BLMP54132 1417 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 A0A0G2JLL6 359 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 A0A1W2PQJ5 194 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SYCE3A1L190 88 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CGB1A6NKQ9 187 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PPM1DO15297 605 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RGS10O43665 173 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RNASEH1O60930 286 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SMC2O95347 1197 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MT-CO3P00414 261 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SLC8A1P32418 973 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CLCN4P51793 760 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MNAT1P51948 309 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DUSP6Q16828 381 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 LRIT3Q3SXY7 679 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NKAIN1Q4KMZ8 207 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PODNL1Q6PEZ8 512 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CACNA2D4Q7Z3S7 1137 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DDIASQ8IXT1 998 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MAGEC3Q8TD91 643 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SAT2Q96F10 170 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CPNE1Q99829 537 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TM6SF1Q9BZW5 370 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TRIM6Q9C030 488 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 B3GNT4Q9C0J1 378 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 Q9N2K0 584 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DNAJC4Q9NNZ3 241 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 FANCFQ9NPI8 374 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 BARHL2Q9NY43 387 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CHKBQ9Y259 395 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 V9GYY5 206 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 C1orf167Q5SNV9 1468 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 IL16Q14005 1332 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 MBLAC1A4D2B0 266 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 FOXO6A8MYZ6 492 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 KIF2AO00139 706 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 LGALS8O00214 317 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NDUFS8O00217 210 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 POLR3GO15318 223 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 GPANK1O95872 356 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 OR2T7P0C7T2 308 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 THRBP10828 461 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CREB1P16220 341 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ARF4P18085 180 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 JAK1P23458 1154 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SFNP31947 248 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CNN1P51911 297 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 WDR5P61964 334 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RPP38P78345 283 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CSTF1Q05048 431 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 BMPR2Q13873 1038 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 GRM7Q14831 915 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SLC39A14Q15043 492 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 MEP1AQ16819 746 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 PDLIM3Q53GG5 364 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 PRAMEF8Q5VWM4 474 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 PRSS55Q6UWB4 352 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 TFAP2DQ7Z6R9 452 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CDR2LQ86X02 465 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ZSWIM9Q86XI8 627 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SLC35F3Q8IY50 421 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 GALNT16Q8N428 558 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 OR13C2Q8NGS9 318 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF671Q8TAW3 534 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 LPIN2Q92539 896 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SNX19Q92543 992 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF583Q96ND8 569 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 MXRA8Q9BRK3 442 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 WDR6Q9NNW5 1121 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 CNOT2Q9NZN8 540 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 OR6C3Q9NZP0 311 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NTMQ9P121 344 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 MGAT4CQ9UBM8 478 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 EPHA6Q9UF33 1036 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SERTAD3Q9UJW9 196 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 MRPS7Q9Y2R9 242 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 BCORQ6W2J9 1755 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 EDC4Q6P2E9 1401 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NME2P1O60361 137 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 NEBLO76041 1014 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 OR6B1O95007 311 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 WDPCPO95876 746 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 PENKP01210 267 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SERPINF2P08697 491 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 SPP1P10451 314 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 UNGP13051 313 aaPredicted RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ACO1P21399 889 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 RDXP35241 583 aaKnown RBP2.85□□□□□ -1.95
UBXN4-208ENST00000490163 ARHGAP25P42331 645 aa2.85□□□□□ -1.95
UBXN4-208ENST00000490163 TXNL4AP83876 142 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms