RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 FAM129CQ86XR2 697 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 DTX1Q86Y01 620 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 LKAAEAR1Q8TD35 194 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 CDKL2Q92772 493 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 DCUN1D1Q96GG9 259 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 BBC3Q96PG8 261 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 TEFMQ96QE5 360 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 GPR22Q99680 433 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ZPBPQ9BS86 351 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 CNOT10Q9H9A5 744 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 TMBIM4Q9HC24 238 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 NSMCE4AQ9NXX6 385 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC39A1Q9NY26 324 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 PSMC3IPQ9P2W1 217 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 SMIM23A6NLE4 172 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 OR52A4PA6NMU1 304 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 A8MU76 341 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 RASGRF2O14827 1237 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CDH16O75309 829 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 C9P02748 559 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CAPZBP47756 277 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CDKN2DP55273 166 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 MC2RQ01718 297 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 GPR18Q14330 331 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 NFE2L1Q14494 772 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CLCA4Q14CN2 919 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 TGIF1Q15583 401 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 KRT71Q3SY84 523 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 AARS2Q5JTZ9 985 aaKnown RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 MANEAQ5SRI9 462 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 METRNLQ641Q3 311 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 KLHL35Q6PF15 583 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 DET1Q7L5Y6 550 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 TAOK1Q7L7X3 1001 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 SDCCAG8Q86SQ7 713 aaPredicted RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 RIBC1Q8N443 379 aaPredicted RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CLDN19Q8N6F1 224 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 BMPERQ8N8U9 685 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 SGF29Q96ES7 293 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 PGM2Q96G03 612 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 WBP1Q96G27 269 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 LINC00615Q96LM1 132 aaPredicted RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 COPS8Q99627 209 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 OLFM1Q99784 485 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 AARSD1Q9BTE6 412 aaKnown RBP10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 FBXO8Q9NRD0 319 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 OCIAD1Q9NX40 245 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 GALPQ9UBC7 116 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 KLHL3Q9UH77 587 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 ACSL5Q9ULC5 683 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 CRYL1Q9Y2S2 319 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 B3GALT1Q9Y5Z6 326 aa10.29□□□□□ -0.76
SCAMP4-208ENST00000489554 IGSF10Q6WRI0 2623 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 FAM95CA0A1B0GW59 222 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 A0A1W2PPM1 405 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TRIM49D1C9J1S8 452 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 PRMT5O14744 637 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 NDUFS3O75489 264 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 RFPL1O75677 317 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 INHBAP08476 426 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ATP1B2P14415 290 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TYRP1P17643 537 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 FDXRP22570 491 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 SPRP35270 261 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 GMPRP36959 345 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 PRLHRP49683 370 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 SERPINB9P50453 376 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TMED2Q15363 201 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ZKSCAN8Q15776 578 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 RPE65Q16518 533 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TAF1BQ53T94 588 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TTMPQ5BVD1 217 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 RNF187Q5TA31 235 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 LYPLAL1Q5VWZ2 237 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ANKS6Q68DC2 871 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 CEACAM20Q6UY09 585 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TIFABQ6ZNK6 161 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 FAM83HQ6ZRV2 1179 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF771Q7L3S4 317 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 CEP97Q8IW35 865 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 OTUD6BQ8N6M0 293 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ZSCAN1Q8NBB4 408 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 GIMAP7Q8NHV1 300 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 HM13Q8TCT9 377 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ZFPM2Q8WW38 1151 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TLCD1Q96CP7 247 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 ZDHHC12Q96GR4 267 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 NDNQ99608 321 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms