RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TAS2R14Q9NYV8 317 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 DNMT3AQ9Y6K1 912 aaPredicted RBP14.37□□□□□ -0.11
UFD1-209ENST00000489406 ANK2Q01484 3957 aa14.37□□□□□ -0.11
UFD1-209ENST00000489406 A6NNC1 897 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 POLBP06746 335 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 CHRNB2P17787 502 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 AMPD1P23109 780 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 PTGS2P35354 604 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 GCGRP47871 477 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 ARSEP51690 589 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 GSCP56915 257 aaPredicted RBP14.36□□□□□ -0.11
UFD1-209ENST00000489406 OGDHQ02218 1023 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 NIPAL4Q0D2K0 466 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 CBLBQ13191 982 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 VWA5B2Q8N398 1253 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 ARRDC2Q8TBH0 407 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 SIGLEC12Q96PQ1 595 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 FERD3LQ96RJ6 166 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 XKR8Q9H6D3 395 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 CRIM1Q9NZV1 1036 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 C3orf18Q9UK00 162 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 ACSL5Q9ULC5 683 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 PLCL2Q9UPR0 1127 aa14.36□□□□□ -0.11
UFD1-209ENST00000489406 CHD3Q12873 2000 aaKnown RBP14.36□□□□□ -0.11
UFD1-209ENST00000489406 ARHGEF9O43307 516 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 CES1P23141 567 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 PPP1R2P41236 205 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 HCAR3P49019 387 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 ST13P50502 369 aaKnown RBP14.35□□□□□ -0.11
UFD1-209ENST00000489406 ARSFP54793 590 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 DCAF7P61962 342 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 FMO1Q01740 532 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 PMPCAQ10713 525 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
UFD1-209ENST00000489406 Q5PR19 223 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 FNBP1LQ5T0N5 605 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 ALG1LQ6GMV1 187 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 DNAJC24Q6P3W2 148 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 TMCO3Q6UWJ1 677 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 RIPOR1Q6ZS17 1223 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 TMC3Q7Z5M5 1100 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.35□□□□□ -0.11
UFD1-209ENST00000489406 AMIGO1Q86WK6 493 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 DNAJC22Q8N4W6 341 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 GPR63Q9BZJ6 419 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 NLRC4Q9NPP4 1024 aa14.35□□□□□ -0.11
UFD1-209ENST00000489406 ANK3Q12955 4377 aaKnown RBP14.35□□□□□ -0.11
UFD1-209ENST00000489406 A8MUI8 341 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 DSCR3O14972 297 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 PTGER1P34995 402 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
UFD1-209ENST00000489406 NUP107P57740 925 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 CDR2Q01850 454 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 FBXW10Q5XX13 1052 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 PODNL1Q6PEZ8 512 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 NLRP9Q7RTR0 991 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 OR52E1Q8NGJ3 308 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 STT3BQ8TCJ2 826 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 MIEF2Q96C03 454 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 RBM41Q96IZ5 413 aaKnown RBP14.34□□□□□ -0.11
UFD1-209ENST00000489406 Q96MF0 132 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 CHRNA10Q9GZZ6 450 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 BPIFA1Q9NP55 256 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 ANKRD10Q9NXR5 420 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 EURLQ9NYK6 297 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 HEBP2Q9Y5Z4 205 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 MAU2Q9Y6X3 613 aa14.34□□□□□ -0.11
UFD1-209ENST00000489406 IGHV1-45A0A0A0MS14 117 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 A0A1B0GTH9 108 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 TCRBV5S1A1TA0A578 114 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 MGAT4DA6NG13 374 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 CALB1P05937 261 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ZGLP1P0C6A0 271 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 UGT2B7P16662 529 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 DESP17661 470 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 CXCR2P25025 360 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 PKP1Q13835 747 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ATP13A4Q4VNC1 1196 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 RNFT1Q5M7Z0 435 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 DCUN1D2Q6PH85 259 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ARHGEF18Q6ZSZ5 1173 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 DET1Q7L5Y6 550 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 GALNTL5Q7Z4T8 443 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 DTWD1Q8N5C7 304 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 LILRA3Q8N6C8 439 aaPredicted RBP14.33□□□□□ -0.12
UFD1-209ENST00000489406 MDS2Q8NDY4 140 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 DENND1AQ8TEH3 1009 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 NAT14Q8WUY8 206 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 BDH2Q9BUT1 245 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ADGRE3Q9BY15 652 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ZCCHC2Q9C0B9 1178 aaKnown RBP14.33□□□□□ -0.12
UFD1-209ENST00000489406 TFB2MQ9H5Q4 396 aaKnown RBP14.33□□□□□ -0.12
UFD1-209ENST00000489406 CUTCQ9NTM9 273 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 RBM22Q9NW64 420 aaKnown RBP eCLIP14.33□□□□□ -0.121e-7■■□□□ 12.9
UFD1-209ENST00000489406 BEX4Q9NWD9 120 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms