RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MAGEA6P43360 314 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 POLE2P56282 527 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 KCNAB2Q13303 367 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 TSTA3Q13630 321 aaPredicted RBP8.83□□□□□ -1
HDAC6-232ENST00000489053 SEMA3AQ14563 771 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 SF1Q15637 639 aaKnown RBP8.83□□□□□ -1
HDAC6-232ENST00000489053 CYP1B1Q16678 543 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 LONRF1Q17RB8 773 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 PLEKHS1Q5SXH7 462 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ANKRD22Q5VYY1 191 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 CNSTQ6PJW8 725 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 TRIM73Q86UV7 250 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 REXO1L1PQ8IX06 675 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 KLHL7Q8IXQ5 586 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ZNF843Q8N446 348 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 DENND1AQ8TEH3 1009 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 CT55Q8WUE5 264 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 FAM136AQ96C01 138 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 SERPINB12Q96P63 405 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 TRAPPC9Q96Q05 1148 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 FAM167BQ9BTA0 163 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 SLC12A9Q9BXP2 914 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ADNPQ9H2P0 1102 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 PPANQ9NQ55 473 aaKnown RBP8.83□□□□□ -1
HDAC6-232ENST00000489053 FAM114A2Q9NRY5 505 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 INTS10Q9NVR2 710 aaKnown RBP8.83□□□□□ -1
HDAC6-232ENST00000489053 SEMA5BQ9P283 1151 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 CIDEBQ9UHD4 219 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 SNX7Q9UNH6 387 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 POLHQ9Y253 713 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 MAN2B2Q9Y2E5 1009 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 CRYL1Q9Y2S2 319 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 AP1M2Q9Y6Q5 423 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ZNF839A8K0R7 811 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 MKRN2OSH3BPM6 223 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 RASGRF2O14827 1237 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 SLC28A2O43868 658 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 CREG1O75629 220 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 USP1O94782 785 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 TIAF1O95411 115 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 S1PR4O95977 384 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 CATP04040 527 aaKnown RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 PKMP14618 531 aaKnown RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 PVRP15151 417 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 PGAM1P18669 254 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 WT1P19544 449 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 PKLRP30613 574 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 DR1Q01658 176 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 PTK6Q13882 451 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 NAA25Q14CX7 972 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 SLC5A12Q1EHB4 618 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 DEFB110Q30KQ9 67 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 ANKRD20A4Q4UJ75 823 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 ZNF658BQ4V348 819 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 SYDE1Q6ZW31 735 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 PALM2Q8IXS6 379 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 LMNTD2Q8IXW0 634 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 ADGRF3Q8IZF5 1079 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 PDIK1LQ8N165 341 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 C2orf73Q8N5S3 287 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 ZBTB2Q8N680 514 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC6-232ENST00000489053 C9orf43Q8TAL5 461 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 LPGAT1Q92604 370 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 DLG3Q92796 817 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 ZNF501Q96CX3 271 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 PPM1MQ96MI6 270 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 NAT9Q9BTE0 207 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 NDC1Q9BTX1 674 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 PITPNM3Q9BZ71 974 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 SPRY4Q9C004 299 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 DDX47Q9H0S4 455 aaKnown RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 SLC25A18Q9H1K4 315 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 P2RY12Q9H244 342 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 ACTL8Q9H568 366 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 GEMIN8Q9NWZ8 242 aaKnown RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 NDOR1Q9UHB4 597 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 SRPK3Q9UPE1 567 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 MRPS18BQ9Y676 258 aaKnown RBP8.82□□□□□ -1
HDAC6-232ENST00000489053 SAR1BQ9Y6B6 198 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 FAM169AQ9Y6X4 670 aa8.82□□□□□ -1
HDAC6-232ENST00000489053 B8ZZF3 427 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 MEN1O00255 615 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 ZNF185O15231 689 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 ZSCAN9O15535 394 aaPredicted RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 NIPSNAP2O75323 286 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 VPS26AO75436 327 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 GPC4O75487 556 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 RFPL1O75677 317 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 TMEM63AO94886 807 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 SLCO2B1O94956 709 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 TTC4O95801 387 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 SYF2O95926 243 aaKnown RBP8.81□□□□□ -1
HDAC6-232ENST00000489053 CD63P08962 238 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 ERVK-10P10266 1014 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 CD9P21926 228 aa8.81□□□□□ -1
HDAC6-232ENST00000489053 PTPN4P29074 926 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms