RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TIPARPQ7Z3E1 657 aaKnown RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 ANKRD18AQ8IVF6 992 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 PHC2Q8IXK0 858 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CNTROBQ8N137 903 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 TBC1D16Q8TBP0 767 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF597Q96LX8 424 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 NKX3-1Q99801 234 aaPredicted RBP1.96□□□□□ -2.1
CCDC93-209ENST00000488908 P4HTMQ9NXG6 502 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 LYVE1Q9Y5Y7 322 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 CYP46A1Q9Y6A2 500 aa1.96□□□□□ -2.1
CCDC93-209ENST00000488908 ANKRD61A6NGH8 418 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF354AO60765 605 aaPredicted RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 CDK2AP2O75956 126 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF19P17023 458 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ICAM3P32942 547 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 RPL21P46778 160 aaKnown RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 HARS2P49590 506 aaKnown RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 CSNK2BP67870 215 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 OS9Q13438 667 aaPredicted RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 SLC25A53Q5H9E4 307 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 FAM182AQ5T1J6 154 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ACSM2BQ68CK6 577 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 HAUS6Q7Z4H7 955 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 OR13C3Q8NGS6 347 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 OR1L3Q8NH93 324 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 MOAP1Q96BY2 351 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 DACH2Q96NX9 599 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 SDHCQ99643 169 aaPredicted RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ATF6BQ99941 703 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 YTHDF1Q9BYJ9 559 aaKnown RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 S1PR5Q9H228 398 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF701Q9NV72 531 aaPredicted RBP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 TAS2R10Q9NYW0 307 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 CACNG4Q9UBN1 327 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 PLCL2Q9UPR0 1127 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 NAALADL1Q9UQQ1 740 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 GPR52Q9Y2T5 361 aa1.95□□□□□ -2.1
CCDC93-209ENST00000488908 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.95□□□□□ -2.1
CCDC93-209ENST00000488908 IGHV4-30-2A0A087WSY4 118 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 CDX4O14627 284 aaPredicted RBP1.94□□□□□ -2.1
CCDC93-209ENST00000488908 RNASEH1O60930 286 aaKnown RBP1.94□□□□□ -2.1
CCDC93-209ENST00000488908 CNTFP26441 200 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 NMBRP28336 390 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 PDHA2P29803 388 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 MAZP56270 477 aaKnown RBP1.94□□□□□ -2.1
CCDC93-209ENST00000488908 PPP2R2BQ00005 443 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 MS4A18Q3C1V0 323 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 LCN1P1Q5VSP4 162 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 GLDNQ6ZMI3 551 aaPredicted RBP1.94□□□□□ -2.1
CCDC93-209ENST00000488908 LDHAL6AQ6ZMR3 332 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 TRIML1Q8N9V2 468 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 POC5Q8NA72 575 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 OR13J1Q8NGT2 312 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 OR52N5Q8NH56 324 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 MAP3K3Q99759 626 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 C1QTNF1Q9BXJ1 281 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 FAM49AQ9H0Q0 323 aaPredicted RBP1.94□□□□□ -2.1
CCDC93-209ENST00000488908 MTUS1Q9ULD2 1270 aa1.94□□□□□ -2.1
CCDC93-209ENST00000488908 FAM205AQ6ZU69 1335 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 TGFB1I1O43294 461 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 PBX3P40426 434 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 NIPAL4Q0D2K0 466 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 PCGF3Q3KNV8 242 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 C2orf83Q53S99 150 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 LCLAT1Q6UWP7 414 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 ARMC8Q8IUR7 673 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 ZC3H3Q8IXZ2 948 aaKnown RBP1.93□□□□□ -2.1
CCDC93-209ENST00000488908 EID3Q8N140 333 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 IRGQQ8WZA9 623 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 ZKSCAN4Q969J2 545 aaPredicted RBP1.93□□□□□ -2.1
CCDC93-209ENST00000488908 URM1Q9BTM9 101 aaKnown RBP1.93□□□□□ -2.1
CCDC93-209ENST00000488908 OR2B2Q9GZK3 357 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 THAP2Q9H0W7 228 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 ADNPQ9H2P0 1102 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 PARLQ9H300 379 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 POLR1BQ9H9Y6 1135 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 RRP7BPQ9NSQ0 103 aa1.93□□□□□ -2.1
CCDC93-209ENST00000488908 NPIPB15A6NHN6 443 aaPredicted RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 TO15178 435 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 CEACAM4O75871 244 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 THY1P04216 161 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 UBL4AP11441 157 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF32P17041 273 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 TMEM11P17152 192 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF79Q15937 498 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 ITPRIPL2Q3MIP1 535 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 RARS2Q5T160 578 aaKnown RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 INTS11Q5TA45 600 aaKnown RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 SLC9C2Q5TAH2 1124 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 TMEM198Q66K66 360 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 CYP20A1Q6UW02 462 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 G2E3Q7L622 706 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 TMEM139Q8IV31 216 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 FAM114A1Q8IWE2 563 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 CDK20Q8IZL9 346 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 HJURPQ8NCD3 748 aaPredicted RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 CNRIP1Q96F85 164 aaPredicted RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 OVOL2Q9BRP0 275 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 TEX13BQ9BXU2 312 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 HOXD1Q9GZZ0 328 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms